Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCIIIJIC_20 | 782355 | 783491 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| OCIIIJIC_20 | 781342 | 782142 | ErmF | ARO:3000498 | ErmF | 99.25 | 100.00 | M17124.1 |
| OCIIIJIC_18 | 604890 | 605792 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| OCIIIJIC_18 | 582634 | 583839 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| OCIIIJIC_5 | 27756 | 29681 | tet(Q) | ARO:3000191 | tet(Q) | 97.19 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OCIIIJIC_20 | 781342 | 782142 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M17808 |
| OCIIIJIC_20 | 782355 | 783521 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| OCIIIJIC_18 | 604890 | 605792 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | FR688022 |
| OCIIIJIC_5 | 27756 | 29681 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.30 | 100.00 | X58717 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OCIIIJIC_18 | 604890 | 605789 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| OCIIIJIC_18 | 582100 | 582609 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| OCIIIJIC_20 | 781342 | 782139 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_002682030.1 |
| OCIIIJIC_20 | 782358 | 783521 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.48 | 100.00 | WP_008651082.1 |
| OCIIIJIC_18 | 582637 | 583839 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
| OCIIIJIC_5 | 27759 | 29681 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.19 | 100.00 | WP_002560998.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||