Genome ID:GCA_024300805.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3245.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
INIABOHE_1533870534919clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
INIABOHE_1533870534905cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
INIABOHE_127084162709791tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline86.9399.93X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
INIABOHE_1533870534916clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
INIABOHE_127087092709791tet(L)tetracycline efflux MFS transporter Tet(L)PARTIALX88.0978.82WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
INIABOHE_137237883724969capB0.0CapsuleImmune modulation81.9699.66NP_391471
INIABOHE_137233243723773capC7.30e-112CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
INIABOHE_1102203103339tufA0.0elongation factor Tu86.8195.69AHM69299
INIABOHE_142265514227420pdxS3.54e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
INIABOHE_116430001643776CodY5.01e-124nutrient-responsive regulator81.08100.00ACJ80679
INIABOHE_133112483310376lipA (SAUSA300_0829)1.36e-161lipoic acid synthetase80.8295.41ABD22039