Genome ID:GCA_024397675.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NDLAJEPB_3 | 23522 | 25447 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.31 | AB039845.1 |
| NDLAJEPB_3 | 21952 | 23328 | tet(L) | ARO:3000179 | tet(L) | 98.25 | 100.00 | M11036.1 |
| NDLAJEPB_3 | 20263 | 20910 | catA8 | ARO:3004658 | catA8 | 96.74 | 100.00 | JQ922409.1 |
| NDLAJEPB_3 | 18008 | 18493 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NDLAJEPB_3 | 21952 | 23327 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.49 | 99.93 | AY081910 |
| NDLAJEPB_3 | 23522 | 25447 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.48 | 100.00 | X75073 |
| NDLAJEPB_3 | 20263 | 20910 | cat | Chloramphenicol | 98.77 | 100.00 | U35036 |
| NDLAJEPB_3 | 18008 | 18493 | lnu(A) | Lincomycin | 98.77 | 100.00 | M14039 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NDLAJEPB_3 | 18008 | 18490 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| NDLAJEPB_3 | 23525 | 25447 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.38 | 100.00 | WP_000691727.1 |
| NDLAJEPB_3 | 21955 | 23328 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_002294500.1 |
| NDLAJEPB_3 | 20266 | 20910 | catA | type A-8 chloramphenicol O-acetyltransferase | BLASTX | 97.21 | 100.00 | WP_002352254.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NDLAJEPB_1 | 54502 | 55209 | WalR | 8.11e-115 | transcriptional regulatory protein | 85.17 | 100.43 | EPH95667 |