Genome ID：GCA_024508095.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PJBCCLID_1	2666842	2667696	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
PJBCCLID_1	2648133	2649335	blt	ARO:3003006	blt	100.00	100.00	L32599.1
PJBCCLID_1	2473848	2475017	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PJBCCLID_1	1355834	1356151	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
PJBCCLID_1	1355496	1355834	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PJBCCLID_1	895758	898328	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
PJBCCLID_1	583812	585455	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
PJBCCLID_1	338743	339336	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
PJBCCLID_1	288240	289673	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
PJBCCLID_1	275425	276345	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PJBCCLID_1	2666842	2667696	aadK	Streptomycin	100.00	100.00	M26879
PJBCCLID_1	275425	276345	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
PJBCCLID_1	4119350	4120726	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PJBCCLID_1	2666845	2667696	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
PJBCCLID_1	275425	276342	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
PJBCCLID_1	4116832	4117350	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
PJBCCLID_1	4119353	4120726	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
PJBCCLID_1	583815	585455	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
PJBCCLID_1	2030435	2033029	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PJBCCLID_1	3628980	3630122	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
PJBCCLID_1	3630605	3631786	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
PJBCCLID_1	3630141	3630590	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
PJBCCLID_1	1983205	1984968	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
PJBCCLID_1	3222671	3223456	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
PJBCCLID_1	3218835	3219773	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
PJBCCLID_1	3221449	3222645	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
PJBCCLID_1	3219801	3221420	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
PJBCCLID_1	3211679	3218815	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
PJBCCLID_1	2274401	2275042	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PJBCCLID_1	132461	133597	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PJBCCLID_1	18653	19522	pdxS	3.08e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PJBCCLID_1	1669106	1669882	CodY	3.36e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
PJBCCLID_1	3477393	3477962	ClpP	2.49e-98	part of proteolytic complex	81.05	97.44	BAB94595