Genome ID:GCA_024623085.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DBGEFFLF_11497334497672ykkCARO:3003063ykkC100.00100.00AL009126.1
DBGEFFLF_11497017497334ykkDARO:3003064ykkD99.05100.00AL009126.1
DBGEFFLF_24344246345166mphKARO:3004541mphK97.39100.00CP010314.1
DBGEFFLF_24330913332352lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
DBGEFFLF_24281196281789tmrBARO:3003059tmrB97.97100.00AL009126.3
DBGEFFLF_26207871209073bltARO:3003006blt99.75100.00L32599.1
DBGEFFLF_26179103179957aadKARO:3002627aadK98.59100.00AL009126.1
DBGEFFLF_36250963678bmrARO:3003007bmr99.74100.00M33768.1
DBGEFFLF_242910130747vmlRARO:3004476vmlR98.18100.18NC_000964.3
DBGEFFLF_292732329893Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DBGEFFLF_26179103179957aadKStreptomycin98.83100.00M26879
DBGEFFLF_24344246345166mph(K)Spiramycin, Telithromycin97.18100.00NC_000964
DBGEFFLF_27242409243354tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.5868.70D12567

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DBGEFFLF_26179103179954aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
DBGEFFLF_242910130744vmlRABC-F type ribosomal protection protein VmlRBLASTX98.18100.00WP_003234144.1
DBGEFFLF_24344249345166mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
DBGEFFLF_22197954200551rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.76100.00WP_087347987.1
DBGEFFLF_27242410243354tet(L)tetracycline efflux MFS transporter Tet(L)PARTIALX99.0568.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DBGEFFLF_25231813232994capB0.0CapsuleImmune modulation99.75100.00NP_391471
DBGEFFLF_22340114340755hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
DBGEFFLF_26328064065dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
DBGEFFLF_25233009233458capC0.0CapsuleImmune modulation99.33100.00NP_391470
DBGEFFLF_25233477234619capA0.0CapsuleImmune modulation99.21100.00NP_391469
DBGEFFLF_26792175057dhbF0.0BacillibactinNutritional/Metabolic factor98.92100.00NP_391076
DBGEFFLF_26696367901dhbB0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391077
DBGEFFLF_26409165287dhbC0.0BacillibactinNutritional/Metabolic factor98.66100.00NP_391079
DBGEFFLF_22151015152778dep/capD0.0CapsuleImmune modulation98.64100.00NP_389723
DBGEFFLF_26531666935dhbE0.0BacillibactinNutritional/Metabolic factor97.22100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DBGEFFLF_42800226866tufA0.0elongation factor Tu85.7595.69AHM69299
DBGEFFLF_1243415210pdxS4.55e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
DBGEFFLF_11187124186348CodY4.36e-125nutrient-responsive regulator81.08100.00ACJ80679
DBGEFFLF_25391600391031ClpP2.44e-99part of proteolytic complex81.0597.44BAB94595
DBGEFFLF_23142287141895spxA12.77e-70redox-responsive transcription factor83.97100.00AAF21893
DBGEFFLF_23142287141895spx1.65e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
DBGEFFLF_52055620798SpoVG7.50e-39RNA-binding protein81.4879.41AAT02994
DBGEFFLF_247755777360CspA1.86e-31cold shock protein90.91100.00CAA62903
DBGEFFLF_22351987352181CspD2.96e-28cold shock protein81.5498.48CAC99957
DBGEFFLF_23384713384907CspB3.99e-27cold shock protein83.0898.48CAD00094