Genome ID:GCA_024653105.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310918.71

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GBLIBGMN_2274212275132mphKARO:3004541mphK100.00100.00CP010314.1
GBLIBGMN_2260878262317lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
GBLIBGMN_2211221211814tmrBARO:3003059tmrB100.00100.00AL009126.3
GBLIBGMN_9136091138661Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
GBLIBGMN_6115623115961ykkCARO:3003063ykkC100.00100.00AL009126.1
GBLIBGMN_6115306115623ykkDARO:3003064ykkD100.00100.00AL009126.1
GBLIBGMN_184735548998vmlRARO:3004476vmlR100.00100.00NC_000964.3
GBLIBGMN_43686637720aadKARO:3002627aadK100.00100.00AL009126.1
GBLIBGMN_83462935798bmrARO:3003007bmr99.74100.00M33768.1
GBLIBGMN_41815719359bltARO:3003006blt100.00100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GBLIBGMN_43686637720aadKStreptomycin100.00100.00M26879
GBLIBGMN_2274212275132mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
GBLIBGMN_33638037756tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GBLIBGMN_43686937720aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
GBLIBGMN_2274215275132mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
GBLIBGMN_33975640274satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
GBLIBGMN_33638037753tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
GBLIBGMN_184735848998vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
GBLIBGMN_171256315157rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GBLIBGMN_1200167201309capA0.0CapsuleImmune modulation100.00100.00NP_391469
GBLIBGMN_1201792202973capB0.0CapsuleImmune modulation100.00100.00NP_391471
GBLIBGMN_1201328201777capC0.0CapsuleImmune modulation100.00100.00NP_391470
GBLIBGMN_176005261815dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
GBLIBGMN_272228423069dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
GBLIBGMN_272596726905dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
GBLIBGMN_272309524291dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
GBLIBGMN_272432025939dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
GBLIBGMN_272692534061dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
GBLIBGMN_3585009141hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GBLIBGMN_32974510881tufA0.0elongation factor Tu84.9695.69AHM69299
GBLIBGMN_4542315100pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GBLIBGMN_73542134645CodY1.37e-125nutrient-responsive regulator81.08100.00ACJ80679
GBLIBGMN_15557356142ClpP2.66e-99part of proteolytic complex81.0597.44BAB94595
GBLIBGMN_2823251933spxA19.88e-71redox-responsive transcription factor83.21100.00AAF21893
GBLIBGMN_233457534333SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
GBLIBGMN_1818832080CspA3.37e-32cold shock protein90.91100.00CAA62903
GBLIBGMN_293771437520CspD2.52e-29cold shock protein81.5498.48CAC99957
GBLIBGMN_165644256636CspB8.04e-28cold shock protein83.0898.48CAD00094