Genome ID：GCA_024752515.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PIHAMLIP_1	2735310	2736164	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
PIHAMLIP_1	2716601	2717803	blt	ARO:3003006	blt	100.00	100.00	L32599.1
PIHAMLIP_1	2494282	2495451	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PIHAMLIP_1	1376531	1376848	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
PIHAMLIP_1	1376193	1376531	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PIHAMLIP_1	916449	919019	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
PIHAMLIP_1	604407	606050	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
PIHAMLIP_1	338832	339425	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
PIHAMLIP_1	288329	289762	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
PIHAMLIP_1	275514	276434	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PIHAMLIP_1	2735310	2736164	aadK	Streptomycin	100.00	100.00	M26879
PIHAMLIP_1	275514	276434	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
PIHAMLIP_1	4187335	4188711	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PIHAMLIP_1	2735313	2736164	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
PIHAMLIP_1	275514	276431	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
PIHAMLIP_1	4184817	4185335	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
PIHAMLIP_1	4187338	4188711	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
PIHAMLIP_1	604410	606050	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
PIHAMLIP_1	2051005	2053599	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PIHAMLIP_1	3697474	3698616	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
PIHAMLIP_1	3699099	3700280	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
PIHAMLIP_1	3698635	3699084	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
PIHAMLIP_1	2004347	2006110	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
PIHAMLIP_1	3291139	3291924	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
PIHAMLIP_1	3287303	3288241	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
PIHAMLIP_1	3289917	3291113	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
PIHAMLIP_1	3288269	3289888	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
PIHAMLIP_1	3280147	3287283	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
PIHAMLIP_1	2294935	2295576	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PIHAMLIP_1	132553	133689	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PIHAMLIP_1	18746	19615	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PIHAMLIP_1	1689795	1690571	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
PIHAMLIP_1	3545862	3546431	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595