Genome ID:GCA_024788605.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLNNDFKA_12 | 3434803 | 3435537 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| GLNNDFKA_12 | 2044438 | 2045403 | CfxA2 | ARO:3003002 | CfxA2 | 99.69 | 100.00 | AF118110.1 |
| GLNNDFKA_8 | 723416 | 725341 | tet(Q) | ARO:3000191 | tet(Q) | 89.39 | 97.56 | Z21523.1 |
| GLNNDFKA_12 | 161521 | 162345 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GLNNDFKA_12 | 161521 | 162345 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| GLNNDFKA_12 | 2044438 | 2045403 | cfxA3 | Ampicillin | 99.79 | 100.00 | AF472622 |
| GLNNDFKA_12 | 2044438 | 2045403 | cfxA4 | Unknown Beta-lactam | 99.79 | 100.00 | AY769933 |
| GLNNDFKA_12 | 2044438 | 2045403 | cfxA5 | Unknown Beta-lactam | 99.79 | 100.00 | AY769934 |
| GLNNDFKA_12 | 2044438 | 2045403 | cfxA | Cefoxitin, Ampicillin | 99.79 | 100.00 | U38243 |
| GLNNDFKA_12 | 3434803 | 3435537 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| GLNNDFKA_8 | 723416 | 725341 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 99.95 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLNNDFKA_12 | 161521 | 162342 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| GLNNDFKA_12 | 2044441 | 2045403 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.69 | 100.00 | WP_004339683.1 |
| GLNNDFKA_12 | 3434806 | 3435537 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| GLNNDFKA_8 | 723416 | 725338 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.86 | 100.00 | WP_063856407.1 |
| GLNNDFKA_8 | 594092 | 595045 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 83.65 | 99.07 | WP_004348227.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||