Genome ID:GCA_024789585.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 18 | 0 | 0 | 18.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBOGDHGI_5 | 1362706 | 1363569 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| HBOGDHGI_5 | 1360333 | 1361463 | ErmF | ARO:3000498 | ErmF | 99.62 | 141.35 | M17124.1 |
| HBOGDHGI_5 | 1259716 | 1260681 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_5 | 792696 | 793586 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| HBOGDHGI_2 | 459503 | 460468 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_4 | 445132 | 447057 | tet(Q) | ARO:3000191 | tet(Q) | 96.88 | 97.56 | Z21523.1 |
| HBOGDHGI_16 | 347428 | 348360 | CfxA3 | ARO:3003003 | CfxA3 | 99.68 | 96.57 | AF472622.2 |
| HBOGDHGI_4 | 343863 | 344828 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_5 | 280040 | 281005 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_6 | 232614 | 233579 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_6 | 222545 | 223477 | CfxA3 | ARO:3003003 | CfxA3 | 99.68 | 96.57 | AF472622.2 |
| HBOGDHGI_6 | 178709 | 179641 | CfxA3 | ARO:3003003 | CfxA3 | 99.68 | 96.57 | AF472622.2 |
| HBOGDHGI_13 | 99582 | 100547 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_5 | 90573 | 91538 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_11 | 80931 | 81896 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_4 | 31959 | 32924 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HBOGDHGI_2 | 18556 | 19521 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HBOGDHGI_11 | 80931 | 81896 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| HBOGDHGI_5 | 1360663 | 1361463 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| HBOGDHGI_4 | 445132 | 447057 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.95 | 100.00 | X58717 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBOGDHGI_5 | 1362709 | 1363569 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| HBOGDHGI_5 | 792699 | 793586 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| HBOGDHGI_11 | 80931 | 81893 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_13 | 99585 | 100547 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_2 | 18556 | 19518 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_2 | 459503 | 460465 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_4 | 31962 | 32924 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_4 | 343866 | 344828 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_5 | 1259716 | 1260678 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_5 | 280043 | 281005 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_5 | 90576 | 91538 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_6 | 232617 | 233579 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HBOGDHGI_5 | 1360663 | 1361460 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| HBOGDHGI_4 | 445132 | 447054 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.84 | 100.00 | WP_004293868.1 |
| HBOGDHGI_16 | 347398 | 348357 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 99.06 | 99.69 | WP_004348227.1 |
| HBOGDHGI_6 | 178679 | 179638 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 99.06 | 99.69 | WP_004348227.1 |
| HBOGDHGI_6 | 222548 | 223507 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 99.06 | 99.69 | WP_004348227.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||