Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPOMFEGA_5 | 3968725 | 3970650 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PPOMFEGA_5 | 1781617 | 1782440 | blaOXA-347 | Unknown Beta-lactam | 99.88 | 99.88 | ACWG01000053 |
| PPOMFEGA_5 | 3968725 | 3970650 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| PPOMFEGA_5 | 6130993 | 6131960 | cfxA3 | Ampicillin | 99.79 | 100.00 | AF472622 |
| PPOMFEGA_5 | 1782643 | 1783443 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.25 | 99.88 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPOMFEGA_5 | 6131160 | 6131960 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | PARTIALX | 100.00 | 83.18 | WP_004348227.1 |
| PPOMFEGA_5 | 3968728 | 3970650 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| PPOMFEGA_5 | 1782646 | 1783326 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | INTERNAL_STOP | 88.99 | 85.34 | WP_002682030.1 |
| PPOMFEGA_5 | 2013788 | 2014750 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | INTERNAL_STOP | 87.42 | 100.00 | WP_004348227.1 |
| PPOMFEGA_5 | 1781910 | 1782437 | blaOXA | class D beta-lactamase | PARTIALX | 93.82 | 64.96 | WP_004295324.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||