Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LMPPAHAM_1 | 1271303 | 1273012 | tet(Q) | ARO:3000191 | tet(Q) | 99.47 | 86.61 | Z21523.1 |
| LMPPAHAM_1 | 1011422 | 1012159 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LMPPAHAM_1 | 1271085 | 1273012 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.90 | 100.00 | Z21523 |
| LMPPAHAM_1 | 1011422 | 1012159 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | U18931 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LMPPAHAM_1 | 1271330 | 1273009 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIALX | 99.64 | 87.36 | WP_002560998.1 |
| LMPPAHAM_1 | 1011422 | 1012156 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||