Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LPOLMMEP_12 | 6465499 | 6467424 | tet(Q) | ARO:3000191 | tet(Q) | 96.26 | 97.56 | Z21523.1 |
| LPOLMMEP_12 | 4700058 | 4701395 | tet(Q) | ARO:3000191 | tet(Q) | 95.90 | 67.73 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LPOLMMEP_12 | 6465499 | 6467424 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
| LPOLMMEP_12 | 5688956 | 5689906 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| LPOLMMEP_12 | 5688956 | 5689906 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| LPOLMMEP_12 | 5688956 | 5689906 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| LPOLMMEP_12 | 5688956 | 5689906 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LPOLMMEP_12 | 5809803 | 5810312 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| LPOLMMEP_12 | 6465502 | 6467424 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.38 | 100.00 | WP_063856407.1 |
| LPOLMMEP_12 | 5810340 | 5811242 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | PARTIALX | 99.34 | 75.06 | WP_063853729.1 |
| LPOLMMEP_12 | 4700022 | 4701395 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 93.01 | 71.45 | WP_002560998.1 |
| LPOLMMEP_12 | 5688955 | 5689908 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||