Genome ID:GCA_024799885.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LEBFBLPE_1 | 2705244 | 2706098 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| LEBFBLPE_1 | 2686063 | 2687265 | blt | ARO:3003006 | blt | 98.75 | 100.00 | L32599.1 |
| LEBFBLPE_1 | 2459334 | 2460503 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| LEBFBLPE_1 | 1349636 | 1349953 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| LEBFBLPE_1 | 1349298 | 1349636 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| LEBFBLPE_1 | 886212 | 888782 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| LEBFBLPE_1 | 589133 | 590776 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.00 | NC_000964.3 |
| LEBFBLPE_1 | 338938 | 339531 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| LEBFBLPE_1 | 288381 | 289814 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| LEBFBLPE_1 | 275566 | 276486 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LEBFBLPE_1 | 4217474 | 4218850 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.93 | 100.00 | X08034 |
| LEBFBLPE_1 | 275566 | 276486 | mph(K) | Spiramycin, Telithromycin | 99.13 | 100.00 | NC_000964 |
| LEBFBLPE_1 | 2705246 | 2706098 | aadK | Streptomycin | 98.12 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LEBFBLPE_1 | 4217477 | 4218850 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| LEBFBLPE_1 | 275566 | 276483 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| LEBFBLPE_1 | 589136 | 590776 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| LEBFBLPE_1 | 2705247 | 2706098 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| LEBFBLPE_1 | 4215003 | 4215521 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| LEBFBLPE_1 | 2161612 | 2164209 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.71 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| LEBFBLPE_1 | 3741561 | 3742742 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| LEBFBLPE_1 | 2260213 | 2260854 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| LEBFBLPE_1 | 3316748 | 3323884 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.47 | 100.00 | NP_391076 |
| LEBFBLPE_1 | 3327740 | 3328525 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| LEBFBLPE_1 | 3323904 | 3324842 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| LEBFBLPE_1 | 3326518 | 3327714 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| LEBFBLPE_1 | 2114646 | 2116409 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| LEBFBLPE_1 | 3324870 | 3326489 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.07 | 100.00 | NP_391078 |
| LEBFBLPE_1 | 3739936 | 3741078 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| LEBFBLPE_1 | 3741097 | 3741546 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LEBFBLPE_1 | 133009 | 134145 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| LEBFBLPE_1 | 19278 | 20147 | pdxS | 3.15e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| LEBFBLPE_1 | 1659448 | 1660224 | CodY | 3.44e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| LEBFBLPE_1 | 3580735 | 3581304 | ClpP | 2.55e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |