Genome ID:GCA_024917175.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 4 | 15.39 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFJFKLM_1 | 2533465 | 2534319 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| DOFJFKLM_1 | 2523261 | 2524463 | blt | ARO:3003006 | blt | 98.00 | 100.00 | L32599.1 |
| DOFJFKLM_1 | 2342954 | 2344123 | bmr | ARO:3003007 | bmr | 98.97 | 100.00 | M33768.1 |
| DOFJFKLM_1 | 1353342 | 1353659 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| DOFJFKLM_1 | 1353004 | 1353342 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DOFJFKLM_1 | 895616 | 898186 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| DOFJFKLM_1 | 593298 | 594923 | vmlR | ARO:3004476 | vmlR | 98.15 | 98.90 | NC_000964.3 |
| DOFJFKLM_1 | 328714 | 329307 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| DOFJFKLM_1 | 274727 | 276160 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| DOFJFKLM_1 | 264727 | 265647 | mphK | ARO:3004541 | mphK | 91.09 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DOFJFKLM_1 | 2533465 | 2534319 | aadK | Streptomycin | 98.95 | 100.00 | M26879 |
| DOFJFKLM_1 | 264727 | 265647 | mph(K) | Spiramycin, Telithromycin | 92.85 | 99.78 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFJFKLM_1 | 2533468 | 2534319 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| DOFJFKLM_1 | 593301 | 594923 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.15 | 98.90 | WP_003234144.1 |
| DOFJFKLM_1 | 264727 | 265635 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 91.09 | 99.02 | WP_003246254.1 |
| DOFJFKLM_1 | 2036164 | 2038761 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.94 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DOFJFKLM_1 | 2140724 | 2141365 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| DOFJFKLM_1 | 3490976 | 3492157 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| DOFJFKLM_1 | 3081913 | 3082698 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| DOFJFKLM_1 | 3490512 | 3490961 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| DOFJFKLM_1 | 1987546 | 1989309 | dep/capD | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | NP_389723 |
| DOFJFKLM_1 | 3489351 | 3490493 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| DOFJFKLM_1 | 3078076 | 3079014 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.51 | 100.00 | NP_391077 |
| DOFJFKLM_1 | 3070920 | 3078056 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.01 | 100.00 | NP_391076 |
| DOFJFKLM_1 | 3079042 | 3080661 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.78 | 100.00 | NP_391078 |
| DOFJFKLM_1 | 3080690 | 3081886 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.07 | 100.00 | NP_391079 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DOFJFKLM_1 | 132329 | 133465 | tufA | 0.0 | elongation factor Tu | 85.22 | 95.69 | AHM69299 |
| DOFJFKLM_1 | 18597 | 19466 | pdxS | 2.98e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DOFJFKLM_1 | 1664196 | 1664972 | CodY | 3.25e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DOFJFKLM_1 | 3340130 | 3340699 | ClpP | 2.41e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |