Genome ID:GCA_025021505.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 10 | 4 | 14.04 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGLDHGEA_1 | 2537328 | 2538530 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| OGLDHGEA_1 | 1466548 | 1466865 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| OGLDHGEA_1 | 1466210 | 1466548 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| OGLDHGEA_1 | 913796 | 916366 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| OGLDHGEA_1 | 610727 | 612373 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| OGLDHGEA_1 | 282872 | 284305 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| OGLDHGEA_1 | 270058 | 270978 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OGLDHGEA_1 | 4085730 | 4087106 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.13 | 100.00 | D12567 |
| OGLDHGEA_1 | 270058 | 270978 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGLDHGEA_1 | 4085733 | 4087106 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| OGLDHGEA_1 | 270058 | 270966 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| OGLDHGEA_1 | 610730 | 612373 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| OGLDHGEA_1 | 4083210 | 4083728 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OGLDHGEA_1 | 3581332 | 3582513 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| OGLDHGEA_1 | 3088299 | 3089084 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.62 | 100.00 | NP_391080 |
| OGLDHGEA_1 | 3579707 | 3580849 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| OGLDHGEA_1 | 3084463 | 3085401 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| OGLDHGEA_1 | 2022638 | 2024401 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| OGLDHGEA_1 | 2141867 | 2142508 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| OGLDHGEA_1 | 3580868 | 3581317 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| OGLDHGEA_1 | 3077307 | 3084443 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.61 | 100.00 | NP_391076 |
| OGLDHGEA_1 | 3087077 | 3088273 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.83 | 100.00 | NP_391079 |
| OGLDHGEA_1 | 3085429 | 3087048 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.10 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OGLDHGEA_1 | 131817 | 132953 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| OGLDHGEA_1 | 17935 | 18804 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OGLDHGEA_1 | 1786289 | 1787065 | CodY | 3.34e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OGLDHGEA_1 | 3431324 | 3431893 | ClpP | 2.47e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |