Genome ID：GCA_025132855.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	27	35	44.20

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LDFHHHAM_67	19474	20343	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
LDFHHHAM_67	20343	20936	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
LDFHHHAM_33	6419	7228	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
LDFHHHAM_67	20343	20936	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
LDFHHHAM_33	7212	8168	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
LDFHHHAM_33	8165	9313	STU_RS16255	0.0	Capsule	Immune modulation	99.74	100.00	WP_041828290
LDFHHHAM_67	20343	20936	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
LDFHHHAM_33	12809	13660	rfbD	0.0	Capsule	Immune modulation	99.65	100.00	WP_014621820
LDFHHHAM_30	13055	14713	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
LDFHHHAM_33	5214	6419	STU_RS16240	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226326
LDFHHHAM_101	2499	3642	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	99.56	100.00	-
LDFHHHAM_44	15993	16592	STR_RS05245	0.0	Capsule	Immune modulation	99.50	100.00	WP_196767671
LDFHHHAM_33	9422	10432	STU_RS16260	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226330
LDFHHHAM_33	2358	4142	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
LDFHHHAM_33	4139	5194	STU_RS16235	0.0	Capsule	Immune modulation	99.43	100.00	WP_002948022
LDFHHHAM_107	318	1733	STER_RS05250	0.0	Capsule	Immune modulation	99.15	100.00	WP_011681165
LDFHHHAM_44	15106	15841	STER_RS05305	0.0	Capsule	Immune modulation	98.91	99.33	WP_011681174
LDFHHHAM_49	59036	60004	cbpD	0.0	Autolysin	Exoenzyme	98.86	100.00	WP_082302295
LDFHHHAM_15	25559	26320	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
LDFHHHAM_44	13664	14395	STER_RS05315	0.0	Capsule	Immune modulation	98.77	100.00	WP_011681176
LDFHHHAM_44	12209	13663	STR_RS05265	0.0	Capsule	Immune modulation	98.76	100.00	WP_041827043
LDFHHHAM_44	16757	17716	STR_RS05240	0.0	Capsule	Immune modulation	98.54	100.00	WP_041827042
LDFHHHAM_44	13664	14395	STU_RS14645	0.0	Capsule	Immune modulation	98.50	100.00	WP_011226048
LDFHHHAM_44	13664	14395	STR_RS05260	0.0	Capsule	Immune modulation	98.36	100.00	WP_011227248
LDFHHHAM_44	15106	15855	STR_RS05250	0.0	Capsule	Immune modulation	98.27	100.00	WP_011227246
LDFHHHAM_44	12209	13663	STU_RS14650	0.0	Capsule	Immune modulation	98.21	100.00	WP_011226049
LDFHHHAM_44	15106	15841	STU_RS14635	0.0	Capsule	Immune modulation	98.10	99.33	WP_011226046
LDFHHHAM_33	10435	11706	STU_RS16265	0.0	Capsule	Immune modulation	97.48	99.76	WP_011226331
LDFHHHAM_44	12209	13663	STER_RS05320	0.0	Capsule	Immune modulation	96.65	99.79	WP_011681177
LDFHHHAM_86	33277	38171	SAG_RS09105	0.0	Agglutinin receptor	Adherence	92.87	99.98	WP_000167699
LDFHHHAM_86	33277	38219	SSU98_0978	0.0	Agglutinin receptor	Adherence	92.82	99.78	YP_001200536
LDFHHHAM_86	33277	38219	SSU05_0965	0.0	Agglutinin receptor	Adherence	92.80	99.78	YP_001198331
LDFHHHAM_44	14404	15096	STER_RS05310	0.0	Capsule	Immune modulation	89.90	100.00	WP_011681175
LDFHHHAM_44	14404	15096	STU_RS14640	0.0	Capsule	Immune modulation	89.75	100.00	WP_011226047
LDFHHHAM_44	14404	15096	STR_RS05255	0.0	Capsule	Immune modulation	89.47	100.00	WP_011227247
LDFHHHAM_39	96831	98134	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
LDFHHHAM_82	14329	15339	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
LDFHHHAM_64	4783	6066	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
LDFHHHAM_67	21365	22411	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LDFHHHAM_15	22872	21889	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
LDFHHHAM_89	13750	12677	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
LDFHHHAM_86	38192	33282	B9H01_RS04765	0.0	glucan-binding protein	93.40	99.63	AUS90958
LDFHHHAM_39	13145	14113	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
LDFHHHAM_77	40785	43088	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
LDFHHHAM_76	13138	11657	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
LDFHHHAM_74	6142	8388	metE	0.0	methionine biosynthesis enzymes	91.72	100.00	AAK74738
LDFHHHAM_80	12607	13605	recA	0.0	DNA recombination and repair	90.99	85.82	AAL00560
LDFHHHAM_25	3364	4335	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
LDFHHHAM_62	73031	74182	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
LDFHHHAM_33	28630	26642	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
LDFHHHAM_15	39071	40801	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
LDFHHHAM_78	26990	28468	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.22	100.00	ADE32434
LDFHHHAM_39	96831	98132	Eno	0.0	enolase	86.21	99.77	ABP90468
LDFHHHAM_78	42179	44071	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
LDFHHHAM_74	11313	9604	PGM	0.0	phosphoglucomutase	83.71	99.65	ACH87041
LDFHHHAM_98	2068	1058	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
LDFHHHAM_38	24209	22848	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
LDFHHHAM_60	48543	46651	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
LDFHHHAM_39	82396	83286	bglB	1.06e-179	putative phospho--glucosidase	88.89	99.66	AAK33487
LDFHHHAM_75	3941	3003	SP_0676	5.99e-169	transcription facot	81.15	97.20	AAK74821
LDFHHHAM_74	8580	9437	metF	1.40e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
LDFHHHAM_90	24438	23734	covR	1.26e-132	responder protein	85.53	100.00	AAK71319
LDFHHHAM_12	19723	19052	rr01	6.85e-126	response regulator	83.93	99.56	CAB54566
LDFHHHAM_90	24438	23734	walR	5.31e-123	DNA-binding response regulator	82.13	100.00	ANC99504
LDFHHHAM_61	7737	7051	CovR	1.29e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
LDFHHHAM_74	15267	15935	CiaR	1.86e-119	two-component response regulator	84.31	99.55	AAK74935
LDFHHHAM_74	15267	15938	ciaR	1.83e-117	two component system response regulator	82.14	99.12	AIK75708
LDFHHHAM_80	13881	14255	SpxA2	8.91e-72	transcriptional regulator	91.20	94.70	ERL21461
LDFHHHAM_38	35568	35969	SpxA1	1.10e-67	transcriptional regulator	80.60	100.00	ERL19273
LDFHHHAM_28	13128	13415	spr0479	1.31e-48	essential gene	85.42	98.97	AAK99283
LDFHHHAM_49	18146	17892	spr1327	1.11e-45	essential gene	95.29	100.00	AAL00131
LDFHHHAM_78	86731	86468	spr0175	4.62e-42	pathogenitcity related	84.09	100.00	AAK98979
LDFHHHAM_78	85904	85638	spr0177	8.16e-34	essential gene	84.27	88.12	AAK98981
LDFHHHAM_64	6224	6724	RopE (M5005_Spy_1611)	1.82e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
LDFHHHAM_77	40785	43082	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
LDFHHHAM_86	3569	2373	AUS90997 (B9H01_RS07385)	0.0	site-specific integrase	97.74	100.00	AUS90997
LDFHHHAM_60	34071	33052	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451