Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHGGOHBP_1 | 2223422 | 2225341 | tet(O) | ARO:3000190 | tet(O) | 97.81 | 100.00 | M18896.2 |
| GHGGOHBP_1 | 2222132 | 2223370 | tet(40) | ARO:3000567 | tet(40) | 99.51 | 101.48 | AM419751.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GHGGOHBP_1 | 2222132 | 2223352 | tet(40) | Doxycycline, Tetracycline | 99.84 | 100.00 | AM419751 |
| GHGGOHBP_1 | 2223422 | 2225341 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.43 | 100.00 | M20925 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHGGOHBP_1 | 2222135 | 2223352 | tet(40) | tetracycline efflux MFS transporter Tet(40) | BLASTX | 99.75 | 100.00 | WP_015573055.1 |
| GHGGOHBP_1 | 2223425 | 2225341 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.37 | 100.00 | WP_014636291.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||