Genome ID:GCA_025187185.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 33 | 47.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GLGHBANG_24 | 20692 | 21531 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| GLGHBANG_8 | 26708 | 27559 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| GLGHBANG_3 | 23227 | 24150 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| GLGHBANG_3 | 22317 | 23267 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| GLGHBANG_3 | 21210 | 22292 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| GLGHBANG_3 | 20146 | 21120 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| GLGHBANG_3 | 19661 | 20140 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| GLGHBANG_3 | 18350 | 19468 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| GLGHBANG_3 | 16060 | 16659 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| GLGHBANG_3 | 15174 | 15923 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| GLGHBANG_3 | 13732 | 14463 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| GLGHBANG_6 | 29938 | 30531 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| GLGHBANG_8 | 14229 | 15974 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| GLGHBANG_8 | 15976 | 17676 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| GLGHBANG_8 | 18896 | 19702 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| GLGHBANG_8 | 19702 | 20643 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| GLGHBANG_8 | 20640 | 21788 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| GLGHBANG_32 | 5371 | 7029 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| GLGHBANG_3 | 24158 | 25579 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| GLGHBANG_3 | 12277 | 13731 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_041827043 |
| GLGHBANG_8 | 17694 | 18896 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011227428 |
| GLGHBANG_3 | 27273 | 28331 | waaB | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_157822584 |
| GLGHBANG_3 | 16823 | 17782 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_041827042 |
| GLGHBANG_3 | 14472 | 15164 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011227247 |
| GLGHBANG_6 | 29938 | 30531 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| GLGHBANG_6 | 29938 | 30531 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| GLGHBANG_6 | 65295 | 66054 | srtA | 0.0 | Sortase A | Exoenzyme | 99.74 | 99.87 | - |
| GLGHBANG_8 | 15976 | 17676 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| GLGHBANG_3 | 14472 | 15164 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.57 | 100.00 | WP_011226047 |
| GLGHBANG_8 | 17694 | 18896 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681436 |
| GLGHBANG_8 | 18896 | 19702 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| GLGHBANG_8 | 19702 | 20643 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| GLGHBANG_20 | 14291 | 15081 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| GLGHBANG_8 | 20640 | 21788 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| GLGHBANG_6 | 30531 | 31400 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| GLGHBANG_3 | 13732 | 14463 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| GLGHBANG_3 | 15174 | 15909 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| GLGHBANG_3 | 13732 | 14463 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| GLGHBANG_8 | 14229 | 15974 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| GLGHBANG_3 | 12277 | 13731 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.01 | 100.00 | WP_011226049 |
| GLGHBANG_3 | 15174 | 15909 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| GLGHBANG_8 | 25327 | 26586 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| GLGHBANG_3 | 12277 | 13731 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.99 | 99.79 | WP_011681177 |
| GLGHBANG_3 | 14472 | 15164 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.75 | 100.00 | WP_011681175 |
| GLGHBANG_33 | 107083 | 108386 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| GLGHBANG_25 | 14302 | 15312 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| GLGHBANG_8 | 18896 | 19702 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| GLGHBANG_21 | 2349 | 3632 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| GLGHBANG_6 | 28463 | 29509 | rfbB | 0.0 | Capsule | Immune modulation | 80.52 | 100.00 | WP_009659423 |
| GLGHBANG_8 | 24632 | 25330 | STER_RS07095 | 5.34e-154 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| GLGHBANG_3 | 17838 | 18074 | STR_RS05235* | 1.06e-120 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| GLGHBANG_8 | 23812 | 24278 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| GLGHBANG_8 | 18159 | 18896 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GLGHBANG_6 | 68741 | 69724 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| GLGHBANG_9 | 59221 | 60294 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| GLGHBANG_33 | 24810 | 25778 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| GLGHBANG_77 | 10481 | 8178 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| GLGHBANG_14 | 13742 | 15988 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| GLGHBANG_90 | 38075 | 36594 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.90 | 100.00 | ABJ54480 |
| GLGHBANG_24 | 1900 | 908 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| GLGHBANG_57 | 130 | 1101 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| GLGHBANG_77 | 124338 | 125489 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| GLGHBANG_77 | 158811 | 160793 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| GLGHBANG_6 | 52549 | 50819 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| GLGHBANG_1 | 26999 | 28477 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| GLGHBANG_33 | 107083 | 108384 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| GLGHBANG_1 | 41735 | 43627 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| GLGHBANG_14 | 18913 | 17204 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| GLGHBANG_4 | 18873 | 19883 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| GLGHBANG_7 | 44544 | 45905 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| GLGHBANG_4 | 69204 | 67312 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| GLGHBANG_33 | 92653 | 93543 | bglB | 2.09e-179 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| GLGHBANG_26 | 1244 | 309 | SP_0676 | 1.90e-169 | transcription facot | 81.73 | 96.89 | AAK74821 |
| GLGHBANG_14 | 16180 | 17037 | metF | 1.14e-166 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| GLGHBANG_20 | 42829 | 43533 | covR | 1.26e-131 | responder protein | 84.68 | 100.00 | AAK71319 |
| GLGHBANG_34 | 29860 | 29189 | rr01 | 5.07e-127 | response regulator | 84.38 | 99.56 | CAB54566 |
| GLGHBANG_20 | 42829 | 43533 | walR | 9.07e-122 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| GLGHBANG_5 | 10111 | 9425 | CovR | 1.70e-119 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| GLGHBANG_14 | 22866 | 23516 | CiaR | 1.84e-118 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| GLGHBANG_14 | 22866 | 23516 | ciaR | 9.48e-116 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| GLGHBANG_24 | 611 | 216 | SpxA2 | 4.30e-76 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| GLGHBANG_7 | 33185 | 32784 | SpxA1 | 1.05e-67 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| GLGHBANG_80 | 25398 | 25111 | spr0479 | 3.35e-49 | essential gene | 86.46 | 98.97 | AAK99283 |
| GLGHBANG_88 | 9906 | 9652 | spr1327 | 1.05e-45 | essential gene | 95.29 | 100.00 | AAL00131 |
| GLGHBANG_1 | 75379 | 75116 | spr0175 | 4.30e-42 | pathogenitcity related | 84.09 | 100.00 | AAK98979 |
| GLGHBANG_1 | 74552 | 74286 | spr0177 | 1.11e-33 | essential gene | 84.27 | 88.12 | AAK98981 |
| GLGHBANG_21 | 3790 | 4290 | RopE (M5005_Spy_1611) | 3.53e-76 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| GLGHBANG_77 | 10481 | 8184 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| GLGHBANG_4 | 54743 | 53724 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |