Genome ID:GCA_025187325.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 26 | 33 | 42.01 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DCPMIAPF_3 | 71447 | 72286 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| DCPMIAPF_3 | 883285 | 884154 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| DCPMIAPF_3 | 882692 | 883285 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| DCPMIAPF_10 | 70068 | 70877 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| DCPMIAPF_3 | 882692 | 883285 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| DCPMIAPF_3 | 14930 | 15622 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_011226047 |
| DCPMIAPF_3 | 882692 | 883285 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| DCPMIAPF_3 | 1104650 | 1106308 | fbp54 | 0.0 | FBPs | Adherence | 99.52 | 100.00 | WP_011227179 |
| DCPMIAPF_10 | 66007 | 67791 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226325 |
| DCPMIAPF_10 | 68863 | 70068 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.25 | 100.00 | WP_011226326 |
| DCPMIAPF_10 | 70861 | 71817 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.16 | 100.00 | WP_011226328 |
| DCPMIAPF_10 | 67788 | 68843 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.15 | 100.00 | WP_002948022 |
| DCPMIAPF_3 | 14930 | 15622 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.13 | 100.00 | WP_011227247 |
| DCPMIAPF_3 | 1170918 | 1171679 | srtA | 0.0 | Sortase A | Exoenzyme | 99.08 | 100.00 | - |
| DCPMIAPF_3 | 1138594 | 1139384 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.74 | 100.00 | - |
| DCPMIAPF_10 | 77997 | 78848 | rfbD | 0.0 | Capsule | Immune modulation | 98.71 | 100.00 | WP_014621820 |
| DCPMIAPF_3 | 284875 | 286290 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.66 | 100.00 | WP_011681165 |
| DCPMIAPF_10 | 74658 | 75620 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 98.65 | 95.25 | WP_011226330 |
| DCPMIAPF_3 | 15631 | 16362 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011681176 |
| DCPMIAPF_10 | 71814 | 72962 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 98.52 | 100.00 | WP_041828290 |
| DCPMIAPF_3 | 15631 | 16362 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011226048 |
| DCPMIAPF_3 | 15631 | 16362 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227248 |
| DCPMIAPF_3 | 16363 | 17823 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.95 | 100.00 | WP_011681177 |
| DCPMIAPF_10 | 75623 | 76894 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.41 | 99.76 | WP_011226331 |
| DCPMIAPF_3 | 16363 | 17823 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.19 | 100.21 | WP_011226049 |
| DCPMIAPF_3 | 16363 | 17823 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.37 | 100.21 | WP_041827043 |
| DCPMIAPF_3 | 12738 | 14105 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 96.13 | 100.00 | WP_011226045 |
| DCPMIAPF_3 | 12740 | 14105 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.88 | 99.85 | WP_011681173 |
| DCPMIAPF_3 | 14162 | 14920 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 93.54 | 100.94 | WP_011681174 |
| DCPMIAPF_3 | 14162 | 14920 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 93.15 | 100.94 | WP_011226046 |
| DCPMIAPF_3 | 14167 | 14920 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 92.84 | 99.07 | WP_011227246 |
| DCPMIAPF_3 | 11004 | 11995 | STU_RS14625* | 0.0 | Capsule | Immune modulation | 90.79 | 99.70 | - |
| DCPMIAPF_3 | 14930 | 15622 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011681175 |
| DCPMIAPF_10 | 40803 | 42106 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.02 | 99.54 | WP_000022832 |
| DCPMIAPF_3 | 645733 | 646743 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.46 | 99.80 | WP_002986042 |
| DCPMIAPF_3 | 83961 | 85244 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| DCPMIAPF_3 | 881217 | 882263 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DCPMIAPF_3 | 1174366 | 1175349 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| DCPMIAPF_3 | 1010618 | 1009545 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| DCPMIAPF_10 | 254249 | 256552 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| DCPMIAPF_10 | 356087 | 355119 | spr0084 | 0.0 | pathogenitcity related | 92.57 | 98.48 | AAK98888 |
| DCPMIAPF_3 | 313386 | 311140 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| DCPMIAPF_10 | 425696 | 427177 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.50 | 100.00 | ABJ54480 |
| DCPMIAPF_10 | 494032 | 493040 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| DCPMIAPF_3 | 814415 | 815386 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| DCPMIAPF_10 | 140374 | 139223 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| DCPMIAPF_10 | 92021 | 90033 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.99 | 100.00 | AE014259_2 |
| DCPMIAPF_3 | 1158168 | 1156438 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| DCPMIAPF_10 | 538083 | 539561 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| DCPMIAPF_10 | 40803 | 42104 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| DCPMIAPF_10 | 553272 | 555164 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| DCPMIAPF_3 | 308215 | 309924 | PGM | 0.0 | phosphoglucomutase | 84.06 | 99.65 | ACH87041 |
| DCPMIAPF_3 | 399508 | 398498 | pdh | 0.0 | pyruvate dehydrogenase | 82.79 | 99.70 | ABP91006 |
| DCPMIAPF_3 | 1078122 | 1079483 | mnmE | 0.0 | central tRNA-modifying GTPase | 81.80 | 99.56 | ABP90420 |
| DCPMIAPF_3 | 349191 | 351083 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| DCPMIAPF_10 | 26364 | 27254 | bglB | 4.35e-179 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| DCPMIAPF_10 | 274553 | 273615 | SP_0676 | 7.70e-168 | transcription facot | 81.15 | 97.20 | AAK74821 |
| DCPMIAPF_3 | 310948 | 310091 | metF | 5.69e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| DCPMIAPF_3 | 54673 | 53969 | covR | 2.88e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| DCPMIAPF_10 | 397600 | 396929 | rr01 | 9.82e-125 | response regulator | 83.93 | 99.56 | CAB54566 |
| DCPMIAPF_3 | 304260 | 303592 | CiaR | 5.75e-123 | two-component response regulator | 86.10 | 99.55 | AAK74935 |
| DCPMIAPF_3 | 54673 | 53969 | walR | 1.21e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| DCPMIAPF_3 | 304260 | 303589 | ciaR | 7.79e-121 | two component system response regulator | 83.93 | 99.12 | AIK75708 |
| DCPMIAPF_3 | 265527 | 264841 | CovR | 6.76e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| DCPMIAPF_10 | 492743 | 492348 | SpxA2 | 1.21e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| DCPMIAPF_3 | 1066762 | 1066361 | SpxA1 | 2.48e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| DCPMIAPF_10 | 452373 | 452660 | spr0479 | 4.63e-48 | essential gene | 86.46 | 98.97 | AAK99283 |
| DCPMIAPF_3 | 658020 | 657766 | spr1327 | 1.82e-44 | essential gene | 95.29 | 100.00 | AAL00131 |
| DCPMIAPF_10 | 586895 | 586632 | spr0175 | 2.34e-41 | pathogenitcity related | 84.09 | 100.00 | AAK98979 |
| DCPMIAPF_10 | 586068 | 585802 | spr0177 | 6.89e-32 | essential gene | 83.15 | 88.12 | AAK98981 |
| DCPMIAPF_3 | 85402 | 85902 | RopE (M5005_Spy_1611) | 2.33e-75 | probable DNA-directed RNA polymerase subunit delta | 82.04 | 87.43 | AAK34603 |
| DCPMIAPF_10 | 254249 | 256546 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| DCPMIAPF_3 | 363648 | 364667 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |