Genome ID:GCA_025367415.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 8 | 18.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DICELNKE_15 | 455916 | 457118 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DICELNKE_15 | 437555 | 438409 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| DICELNKE_1 | 425613 | 425930 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| DICELNKE_1 | 425275 | 425613 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DICELNKE_17 | 259416 | 260336 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| DICELNKE_17 | 246082 | 247521 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| DICELNKE_17 | 196425 | 197018 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| DICELNKE_2 | 47446 | 49089 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DICELNKE_18 | 27510 | 30080 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| DICELNKE_21 | 14028 | 15197 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DICELNKE_15 | 437555 | 438409 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DICELNKE_17 | 259416 | 260336 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| DICELNKE_16 | 36504 | 37880 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DICELNKE_15 | 437555 | 438406 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DICELNKE_17 | 259419 | 260336 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| DICELNKE_16 | 39880 | 40398 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| DICELNKE_16 | 36504 | 37877 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DICELNKE_2 | 47449 | 49089 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DICELNKE_19 | 192883 | 195477 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DICELNKE_12 | 520716 | 521858 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DICELNKE_12 | 522341 | 523522 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DICELNKE_12 | 521877 | 522326 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DICELNKE_19 | 240372 | 242135 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DICELNKE_12 | 114405 | 115190 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DICELNKE_12 | 110569 | 111507 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| DICELNKE_12 | 113183 | 114379 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| DICELNKE_12 | 111535 | 113154 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| DICELNKE_20 | 47883 | 48524 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| DICELNKE_12 | 103413 | 110549 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.97 | 100.00 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DICELNKE_3 | 31763 | 32899 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DICELNKE_6 | 11366 | 10497 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DICELNKE_1 | 738875 | 739651 | CodY | 8.25e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DICELNKE_12 | 369129 | 369698 | ClpP | 3.68e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DICELNKE_1 | 276452 | 276844 | spxA1 | 2.44e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| DICELNKE_4 | 34831 | 34589 | SpoVG | 2.75e-38 | RNA-binding protein | 80.25 | 79.41 | AAT02994 |
| DICELNKE_2 | 1974 | 2171 | CspA | 3.38e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DICELNKE_20 | 60486 | 60680 | CspD | 1.42e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |