Genome ID:GCA_025449235.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
JNDFBEEH_126191352619989aadKARO:3002627aadK98.59100.00AL009126.1
JNDFBEEH_126020362603238bltARO:3003006blt99.25100.00L32599.1
JNDFBEEH_123753492376518bmrARO:3003007bmr99.49100.00M33768.1
JNDFBEEH_113531421353459ykkDARO:3003064ykkD99.05100.00AL009126.1
JNDFBEEH_113528041353142ykkCARO:3003063ykkC100.00100.00AL009126.1
JNDFBEEH_1894478897048Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
JNDFBEEH_1586316587962vmlRARO:3004476vmlR98.91100.18NC_000964.3
JNDFBEEH_1334731335324tmrBARO:3003059tmrB99.49100.00AL009126.3
JNDFBEEH_1284229285662lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
JNDFBEEH_1271416272336mphKARO:3004541mphK98.69100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
JNDFBEEH_140590184060394tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.84100.00D12567
JNDFBEEH_126191352619989aadKStreptomycin98.83100.00M26879
JNDFBEEH_1271416272336mph(K)Spiramycin, Telithromycin98.26100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
JNDFBEEH_140590214060394tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.91100.00WP_063856081.1
JNDFBEEH_1586319587962vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
JNDFBEEH_1271416272333mphKmacrolide 2'-phosphotransferase MphKBLASTX98.69100.00WP_003246254.1
JNDFBEEH_126191382619989aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
JNDFBEEH_140565034057021satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
JNDFBEEH_120629872065575rphCrifamycin-inactivating phosphotransferase RphCINTERNAL_STOP80.14100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
JNDFBEEH_135802003581381capB0.0CapsuleImmune modulation99.75100.00NP_391471
JNDFBEEH_135797363580185capC0.0CapsuleImmune modulation99.56100.00NP_391470
JNDFBEEH_131751253175910dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
JNDFBEEH_131641333171269dhbF0.0BacillibactinNutritional/Metabolic factor99.31100.00NP_391076
JNDFBEEH_135785753579717capA0.0CapsuleImmune modulation99.21100.00NP_391469
JNDFBEEH_131739033175099dhbC0.0BacillibactinNutritional/Metabolic factor99.08100.00NP_391079
JNDFBEEH_120135232015286dep/capD0.0CapsuleImmune modulation98.92100.00NP_389723
JNDFBEEH_121767822177423hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
JNDFBEEH_131712893172227dhbB0.0BacillibactinNutritional/Metabolic factor98.30100.00NP_391077
JNDFBEEH_131722553173874dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
JNDFBEEH_1132416133552tufA0.0elongation factor Tu84.9695.69AHM69299
JNDFBEEH_11860019469pdxS3.03e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
JNDFBEEH_116631751663951CodY3.31e-124nutrient-responsive regulator81.08100.00ACJ80679
JNDFBEEH_134254893426058ClpP2.46e-98part of proteolytic complex81.0597.44BAB94595