Genome ID:GCA_025502505.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DBKNCEDH_1 | 2583426 | 2584280 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| DBKNCEDH_1 | 2564672 | 2565874 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| DBKNCEDH_1 | 2343380 | 2344549 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DBKNCEDH_1 | 1360297 | 1360614 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| DBKNCEDH_1 | 1359959 | 1360297 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DBKNCEDH_1 | 894560 | 897130 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| DBKNCEDH_1 | 603197 | 604840 | vmlR | ARO:3004476 | vmlR | 98.17 | 100.00 | NC_000964.3 |
| DBKNCEDH_1 | 330210 | 330830 | tmrB | ARO:3003059 | tmrB | 97.46 | 104.57 | AL009126.3 |
| DBKNCEDH_1 | 279689 | 281122 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| DBKNCEDH_1 | 266876 | 267796 | mphK | ARO:3004541 | mphK | 99.02 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DBKNCEDH_1 | 266876 | 267796 | mph(K) | Spiramycin, Telithromycin | 99.35 | 100.00 | NC_000964 |
| DBKNCEDH_1 | 2583426 | 2584280 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DBKNCEDH_1 | 266876 | 267793 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.02 | 100.00 | WP_003246254.1 |
| DBKNCEDH_1 | 2583429 | 2584280 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| DBKNCEDH_1 | 603200 | 604840 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.17 | 100.00 | WP_003234144.1 |
| DBKNCEDH_1 | 4062965 | 4063483 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
| DBKNCEDH_1 | 2047872 | 2050469 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.65 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DBKNCEDH_1 | 3569876 | 3571057 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| DBKNCEDH_1 | 3147023 | 3147808 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| DBKNCEDH_1 | 2146071 | 2146712 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| DBKNCEDH_1 | 3145801 | 3146997 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| DBKNCEDH_1 | 1993628 | 1995391 | dep/capD | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | NP_389723 |
| DBKNCEDH_1 | 3569412 | 3569861 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| DBKNCEDH_1 | 3568251 | 3569393 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
| DBKNCEDH_1 | 3136031 | 3143167 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.72 | 100.00 | NP_391076 |
| DBKNCEDH_1 | 3143187 | 3144125 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.40 | 100.00 | NP_391077 |
| DBKNCEDH_1 | 3144153 | 3145772 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DBKNCEDH_1 | 131905 | 133041 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DBKNCEDH_1 | 18179 | 19048 | pdxS | 3.04e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DBKNCEDH_1 | 1671713 | 1672489 | CodY | 3.32e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DBKNCEDH_1 | 3410616 | 3411185 | ClpP | 2.46e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |