Genome ID:GCA_025739325.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 37 | 29 | 47.01 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BPDOKOMM_1 | 43663 | 44502 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| BPDOKOMM_1 | 1311916 | 1312767 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| BPDOKOMM_1 | 1097877 | 1098470 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| BPDOKOMM_1 | 1299438 | 1301183 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| BPDOKOMM_1 | 1301185 | 1302885 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| BPDOKOMM_1 | 1304105 | 1304911 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| BPDOKOMM_1 | 1304911 | 1305852 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| BPDOKOMM_1 | 1305849 | 1306997 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| BPDOKOMM_1 | 969055 | 970173 | STU_RS14550 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226029 |
| BPDOKOMM_1 | 970284 | 970907 | STU_RS14555 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226030 |
| BPDOKOMM_1 | 972230 | 973630 | STU_RS14565 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_179970486 |
| BPDOKOMM_1 | 974126 | 975118 | STU_RS14570 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226034 |
| BPDOKOMM_1 | 975143 | 975868 | STU_RS14575 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041828375 |
| BPDOKOMM_1 | 979616 | 980095 | STU_RS14610 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226040 |
| BPDOKOMM_1 | 980198 | 980683 | STU_RS14615 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226041 |
| BPDOKOMM_1 | 980683 | 981132 | STU_RS14620 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226042 |
| BPDOKOMM_1 | 981141 | 982137 | STU_RS14625* | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| BPDOKOMM_1 | 984540 | 985232 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226047 |
| BPDOKOMM_1 | 985973 | 987427 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226049 |
| BPDOKOMM_1 | 982366 | 983731 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 100.00 | 99.85 | WP_011226045 |
| BPDOKOMM_1 | 862383 | 864041 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| BPDOKOMM_1 | 1302903 | 1304105 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011227428 |
| BPDOKOMM_1 | 971048 | 972223 | STU_RS14560 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011226032 |
| BPDOKOMM_1 | 1133234 | 1133995 | srtA | 0.0 | Sortase A | Exoenzyme | 99.87 | 100.00 | - |
| BPDOKOMM_1 | 983790 | 984530 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_011226046 |
| BPDOKOMM_1 | 976965 | 977605 | STU_RS14590 | 0.0 | Capsule | Immune modulation | 99.84 | 99.84 | WP_041828240 |
| BPDOKOMM_1 | 1097877 | 1098470 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BPDOKOMM_1 | 1097877 | 1098470 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BPDOKOMM_1 | 985241 | 985972 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 99.73 | 100.00 | WP_011226048 |
| BPDOKOMM_1 | 1301185 | 1302885 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| BPDOKOMM_1 | 1302903 | 1304105 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681436 |
| BPDOKOMM_1 | 1304105 | 1304911 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| BPDOKOMM_1 | 1304911 | 1305852 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| BPDOKOMM_1 | 984540 | 985232 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011227247 |
| BPDOKOMM_1 | 1051823 | 1052613 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| BPDOKOMM_1 | 968305 | 969068 | STU_RS14545 | 0.0 | Capsule | Immune modulation | 99.35 | 100.53 | WP_011226028 |
| BPDOKOMM_1 | 1305849 | 1306997 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| BPDOKOMM_1 | 1098470 | 1099339 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| BPDOKOMM_1 | 985241 | 985972 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011227248 |
| BPDOKOMM_1 | 983790 | 984530 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.38 | 100.00 | WP_011681174 |
| BPDOKOMM_1 | 1299438 | 1301183 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| BPDOKOMM_1 | 983795 | 984530 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 98.10 | 98.13 | WP_011227246 |
| BPDOKOMM_1 | 985973 | 987427 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_041827043 |
| BPDOKOMM_1 | 985241 | 985972 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 97.81 | 100.00 | WP_011681176 |
| BPDOKOMM_1 | 1310536 | 1311795 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| BPDOKOMM_1 | 985973 | 987427 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.47 | 99.79 | WP_011681177 |
| BPDOKOMM_1 | 982370 | 983731 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.93 | 99.56 | WP_011681173 |
| BPDOKOMM_1 | 984540 | 985232 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011681175 |
| BPDOKOMM_1 | 603288 | 604591 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| BPDOKOMM_1 | 1593624 | 1594634 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| BPDOKOMM_1 | 1304105 | 1304911 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| BPDOKOMM_1 | 149039 | 150322 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| BPDOKOMM_1 | 1096402 | 1097448 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| BPDOKOMM_1 | 975936 | 976274 | STU_RS19955 | 1.31e-175 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148905 |
| BPDOKOMM_1 | 1309841 | 1310539 | STER_RS07095 | 2.92e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| BPDOKOMM_1 | 1309021 | 1309487 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| BPDOKOMM_1 | 1303368 | 1304105 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BPDOKOMM_1 | 1136682 | 1137665 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BPDOKOMM_1 | 716304 | 717377 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BPDOKOMM_1 | 521051 | 522019 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BPDOKOMM_1 | 1474101 | 1476404 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| BPDOKOMM_1 | 1223546 | 1225027 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| BPDOKOMM_1 | 736828 | 739074 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| BPDOKOMM_1 | 63294 | 64286 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| BPDOKOMM_1 | 27181 | 28152 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BPDOKOMM_1 | 1360270 | 1359119 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| BPDOKOMM_1 | 1325797 | 1323815 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| BPDOKOMM_1 | 1783191 | 1781722 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.96 | 99.39 | ADE32434 |
| BPDOKOMM_1 | 1120488 | 1118758 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| BPDOKOMM_1 | 603288 | 604589 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BPDOKOMM_1 | 1768455 | 1766563 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| BPDOKOMM_1 | 741999 | 740290 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| BPDOKOMM_1 | 1635318 | 1636328 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BPDOKOMM_1 | 889463 | 888102 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| BPDOKOMM_1 | 1685649 | 1683757 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| BPDOKOMM_1 | 588858 | 589748 | bglB | 2.82e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| BPDOKOMM_1 | 801353 | 800418 | SP_0676 | 7.15e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| BPDOKOMM_1 | 739266 | 740123 | metF | 8.37e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| BPDOKOMM_1 | 1024124 | 1023420 | covR | 3.39e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| BPDOKOMM_1 | 1189864 | 1189193 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| BPDOKOMM_1 | 1024124 | 1023420 | walR | 2.43e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| BPDOKOMM_1 | 307977 | 308663 | CovR | 9.74e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BPDOKOMM_1 | 745952 | 746602 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| BPDOKOMM_1 | 745952 | 746602 | ciaR | 6.90e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| BPDOKOMM_1 | 64583 | 64978 | SpxA2 | 3.59e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| BPDOKOMM_1 | 900821 | 901222 | SpxA1 | 3.64e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BPDOKOMM_1 | 150480 | 150980 | RopE (M5005_Spy_1611) | 9.56e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| BPDOKOMM_1 | 1474101 | 1476398 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| BPDOKOMM_1 | 1671188 | 1670169 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |