Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OLGMLOCJ_113 | 8155 | 8649 | lnuC | ARO:3002837 | lnuC | 96.34 | 100.00 | AY928180.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OLGMLOCJ_113 | 8155 | 8649 | lnu(C) | Lincomycin | 98.59 | 100.00 | AY928180 |
| OLGMLOCJ_1 | 64 | 661 | blaTEM-116 | Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin | 100.00 | 69.45 | AY425988 |
| OLGMLOCJ_1 | 64 | 661 | blaTEM-181 | Unknown Beta-lactam | 100.00 | 69.45 | KM977568 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OLGMLOCJ_113 | 8158 | 8649 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 96.34 | 100.00 | WP_063851341.1 |
| OLGMLOCJ_1 | 67 | 660 | blaTEM | TEM family class A beta-lactamase | PARTIAL_CONTIG_ENDX | 100.00 | 69.23 | WP_000027050.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OLGMLOCJ_32 | 32701 | 32898 | CspA | 9.73e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| OLGMLOCJ_32 | 32701 | 32895 | CspR | 4.22e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |