Genome ID:GCA_026123105.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 2 | 6 | 6.63 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EIJMBHOK_1 | 703653 | 705029 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 86.56 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EIJMBHOK_1 | 703653 | 705023 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.43 | 99.78 | WP_003242953.1 |
| EIJMBHOK_1 | 702923 | 703441 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 80.35 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EIJMBHOK_11 | 492884 | 494065 | capB | 0.0 | Capsule | Immune modulation | 82.38 | 99.66 | NP_391471 |
| EIJMBHOK_11 | 494080 | 494529 | capC | 1.72e-117 | Capsule | Immune modulation | 84.03 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EIJMBHOK_15 | 34184 | 33048 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| EIJMBHOK_18 | 4335 | 5204 | pdxS | 8.76e-153 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| EIJMBHOK_1 | 1603458 | 1602682 | CodY | 2.45e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| EIJMBHOK_1 | 256461 | 256853 | spxA1 | 4.48e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| EIJMBHOK_12 | 326061 | 326258 | CspA | 2.27e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| EIJMBHOK_12 | 326061 | 326255 | CspR | 2.98e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| EIJMBHOK_11 | 860174 | 861046 | lipA (SAUSA300_0829) | 3.22e-162 | lipoic acid synthetase | 80.82 | 95.41 | ABD22039 |