Genome ID:GCA_026319435.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2277.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EHFOKGKC_18582786876clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EHFOKGKC_18582786862cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.6198.67KR610408
EHFOKGKC_25356903358279tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.78100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EHFOKGKC_18582786873clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
EHFOKGKC_25356903358273tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.6599.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
EHFOKGKC_14275644276825capB0.0CapsuleImmune modulation81.9699.66NP_391471
EHFOKGKC_14275180275629capC2.87e-114CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EHFOKGKC_123186833004tufA0.0elongation factor Tu86.8195.69AHM69299
EHFOKGKC_1945025371pdxS1.38e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
EHFOKGKC_34186511185735CodY3.66e-125nutrient-responsive regulator81.08100.00ACJ80679
EHFOKGKC_413691036518spxA16.31e-70redox-responsive transcription factor83.21100.00AAF21893
EHFOKGKC_17225472451CspA8.27e-32cold shock protein90.91100.00CAA62903
EHFOKGKC_231136011554CspD3.10e-29cold shock protein80.0098.48CAC99957
EHFOKGKC_231136011557CspB6.43e-29cold shock protein80.30100.00CAD00094
EHFOKGKC_17225472448CspR1.08e-26cold shock protein80.0098.48AAO82613
EHFOKGKC_213842256lipA (SAUSA300_0829)4.02e-163lipoic acid synthetase80.8295.41ABD22039