Genome ID:GCA_026719405.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
7007.00

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GMHPBIEI_33376274377239CfxA3ARO:3003003CfxA3100.00100.00AF472622.2
GMHPBIEI_449370095385tet(Q)ARO:3000191tet(Q)96.4385.39Z21523.1
GMHPBIEI_103554536447CepA-49ARO:3006226CepA-49100.00100.00NG_050387.1
GMHPBIEI_19968710892Mef(En2)ARO:3004659Mef(En2)99.50100.00AF251288.1
GMHPBIEI_2037864298nimEARO:3007107nimE100.00100.00CP036548.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GMHPBIEI_103554536447cepA-49Unknown Beta-lactam100.00100.00U05886
GMHPBIEI_33376274377239cfxA3Ampicillin100.00100.00AF472622
GMHPBIEI_2037864298nimEMetronidazole100.00100.00AM042593
GMHPBIEI_1874348232erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.6399.75M17808
GMHPBIEI_449370095624tet(Q)Doxycycline, Tetracycline, Minocycline96.7899.95X58717

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GMHPBIEI_103554836447cepA-49extended-spectrum class A beta-lactamase CepA-49ALLELEX100.00100.00WP_008659027.1
GMHPBIEI_33376277377239cfxA3extended-spectrum class A beta-lactamase CfxA3EXACTX100.00100.00WP_004348227.1
GMHPBIEI_1991539662lnu(AN2)lincosamide nucleotidyltransferase Lnu(AN2)EXACTX100.00100.00WP_004308783.1
GMHPBIEI_2037894298nimE5-nitroimidazole reductase NimEEXACTX100.00100.00WP_005812773.1
GMHPBIEI_19969010892mef(En2)macrolide efflux MFS transporter Mef(En2)BLASTX99.50100.00WP_063853729.1
GMHPBIEI_449370095382tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)PARTIALX99.4787.52WP_063856409.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found