Genome ID:GCA_026719665.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNKDKHOP_21 | 80455 | 82140 | tet(Q) | ARO:3000191 | tet(Q) | 89.48 | 85.39 | Z21523.1 |
| PNKDKHOP_62 | 215 | 1180 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| PNKDKHOP_75 | 1 | 1731 | tet(Q) | ARO:3000191 | tet(Q) | 97.05 | 87.82 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PNKDKHOP_62 | 215 | 1180 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| PNKDKHOP_75 | 1 | 1683 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 87.38 | X58717 |
| PNKDKHOP_21 | 82426 | 83224 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.25 | 99.75 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNKDKHOP_62 | 215 | 1177 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| PNKDKHOP_75 | 1 | 1683 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 100.00 | 87.52 | WP_004293868.1 |
| PNKDKHOP_21 | 80458 | 82140 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIALX | 90.20 | 87.52 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||