Genome ID：GCA_026793955.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LCAHIECF_5	590578	591780	blt	ARO:3003006	blt	99.00	100.00	L32599.1
LCAHIECF_6	441486	442340	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
LCAHIECF_5	408428	409597	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LCAHIECF_1	212281	213924	vmlR	ARO:3004476	vmlR	98.54	100.00	NC_000964.3
LCAHIECF_7	162486	163079	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
LCAHIECF_7	111936	113375	lmrB	ARO:3002813	lmrB	99.58	100.42	JYFL01000006.1
LCAHIECF_2	107913	108251	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LCAHIECF_2	107596	107913	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LCAHIECF_7	99750	100670	mphK	ARO:3004541	mphK	99.67	100.00	CP010314.1
LCAHIECF_9	27319	29889	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LCAHIECF_7	99750	100670	mph(K)	Spiramycin, Telithromycin	99.57	100.00	NC_000964
LCAHIECF_6	441486	442340	aadK	Streptomycin	98.71	100.00	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LCAHIECF_7	99750	100667	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.67	100.00	WP_003246254.1
LCAHIECF_1	212284	213924	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
LCAHIECF_6	441486	442337	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
LCAHIECF_1	7294	7812	satA	streptothricin N-acetyltransferase SatA	BLASTX	89.60	100.00	WP_003242546.1
LCAHIECF_5	64577	67174	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.29	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LCAHIECF_3	390560	391345	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.87	100.00	NP_391080
LCAHIECF_8	25468	25917	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
LCAHIECF_5	209077	209718	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
LCAHIECF_8	25932	27113	capB	0.0	Capsule	Immune modulation	99.41	100.00	NP_391471
LCAHIECF_8	24307	25449	capA	0.0	Capsule	Immune modulation	98.86	100.00	NP_391469
LCAHIECF_3	394243	395181	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.83	100.00	NP_391077
LCAHIECF_3	391371	392567	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.83	100.00	NP_391079
LCAHIECF_5	10125	11888	dep/capD	0.0	Capsule	Immune modulation	98.36	100.00	NP_389723
LCAHIECF_3	395201	402337	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.36	100.00	NP_391076
LCAHIECF_3	392596	394215	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.96	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LCAHIECF_15	27918	26782	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LCAHIECF_16	4285	5154	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LCAHIECF_4	278673	277897	CodY	3.92e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LCAHIECF_3	115561	114992	ClpP	2.70e-99	part of proteolytic complex	81.05	97.44	BAB94595
LCAHIECF_2	257854	257462	spxA1	3.09e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LCAHIECF_2	257854	257462	spx	1.85e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LCAHIECF_11	34765	34523	SpoVG	7.48e-39	RNA-binding protein	81.48	79.41	AAT02994
LCAHIECF_1	166015	166212	CspA	3.70e-32	cold shock protein	92.42	100.00	CAA62903
LCAHIECF_10	31246	31440	CspB	6.13e-28	cold shock protein	83.08	98.48	CAD00094
LCAHIECF_5	221680	221874	CspD	1.55e-27	cold shock protein	80.00	98.48	CAC99957
LCAHIECF_1	166015	166209	CspR	1.84e-26	cold shock protein	80.00	98.48	AAO82613