Genome ID：GCA_026795275.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	8	17.55

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PLNPAPJP_5	90714	92153	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
PLNPAPJP_24	79929	81131	blt	ARO:3003006	blt	98.00	100.00	L32599.1
PLNPAPJP_5	78524	79444	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
PLNPAPJP_24	62094	62948	aadK	ARO:3002627	aadK	96.83	100.00	AL009126.1
PLNPAPJP_18	59207	60376	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
PLNPAPJP_31	44560	46206	vmlR	ARO:3004476	vmlR	98.54	100.18	NC_000964.3
PLNPAPJP_8	21065	23635	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
PLNPAPJP_52	11186	11503	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
PLNPAPJP_52	10848	11186	ykkC	ARO:3003063	ykkC	99.11	100.00	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PLNPAPJP_6	34411	35790	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	97.97	100.00	X08034
PLNPAPJP_24	62094	62948	aadK	Streptomycin	97.78	100.00	M26879
PLNPAPJP_5	78524	79444	mph(K)	Spiramycin, Telithromycin	97.72	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PLNPAPJP_31	44563	46206	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
PLNPAPJP_6	34411	35787	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	97.82	100.00	WP_003242953.1
PLNPAPJP_5	78524	79441	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
PLNPAPJP_24	62094	62945	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	96.83	100.00	WP_003229862.1
PLNPAPJP_6	37829	38347	satA	streptothricin N-acetyltransferase SatA	BLASTX	95.95	100.00	WP_003242546.1
PLNPAPJP_14	55907	58504	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.83	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PLNPAPJP_1	38138	38779	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
PLNPAPJP_9	458101	459282	capB	0.0	Capsule	Immune modulation	99.49	100.00	NP_391471
PLNPAPJP_2	72032	72817	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.24	100.00	NP_391080
PLNPAPJP_2	72843	74039	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.08	100.00	NP_391079
PLNPAPJP_9	459765	460907	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
PLNPAPJP_2	76673	83809	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.57	100.00	NP_391076
PLNPAPJP_9	459297	459746	capC	0.0	Capsule	Immune modulation	98.44	100.00	NP_391470
PLNPAPJP_2	75715	76653	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.19	100.00	NP_391077
PLNPAPJP_2	74068	75687	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.90	100.00	NP_391078
PLNPAPJP_14	103496	105259	dep/capD	0.0	Capsule	Immune modulation	97.73	100.00	NP_389723

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PLNPAPJP_37	1572	2708	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PLNPAPJP_44	4249	5118	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PLNPAPJP_9	608282	607713	ClpP	4.80e-99	part of proteolytic complex	81.05	97.44	BAB94595
PLNPAPJP_25	5667	5335	spxA1	2.71e-56	redox-responsive transcription factor	81.08	84.73	AAF21893
PLNPAPJP_10	34586	34344	SpoVG	7.48e-39	RNA-binding protein	81.48	79.41	AAT02994
PLNPAPJP_19	149864	150061	CspA	6.73e-32	cold shock protein	90.91	100.00	CAA62903
PLNPAPJP_1	50741	50935	CspD	9.58e-29	cold shock protein	81.54	98.48	CAC99957
PLNPAPJP_13	32162	31968	CspB	2.47e-27	cold shock protein	83.08	98.48	CAD00094