Genome ID:GCA_026799655.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OPHIPIDH_117972691797607ykkCARO:3003063ykkC100.00100.00AL009126.1
OPHIPIDH_117969521797269ykkDARO:3003064ykkD100.00100.00AL009126.1
OPHIPIDH_1678303679472bmrARO:3003007bmr99.74100.00M33768.1
OPHIPIDH_1455953457155bltARO:3003006blt100.00100.00L32599.1
OPHIPIDH_1437592438446aadKARO:3002627aadK100.00100.00AL009126.1
OPHIPIDH_3358873359793mphKARO:3004541mphK100.00100.00CP010314.1
OPHIPIDH_3345539346978lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
OPHIPIDH_3295882296475tmrBARO:3003059tmrB100.00100.00AL009126.3
OPHIPIDH_32925330896vmlRARO:3004476vmlR100.00100.00NC_000964.3
OPHIPIDH_42754630116Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OPHIPIDH_1437592438446aadKStreptomycin100.00100.00M26879
OPHIPIDH_3358873359793mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
OPHIPIDH_53655737933tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OPHIPIDH_1437592438443aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
OPHIPIDH_3358876359793mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
OPHIPIDH_53993340451satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
OPHIPIDH_53655737930tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
OPHIPIDH_32925330893vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
OPHIPIDH_111201951122789rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OPHIPIDH_2398240399382capA0.0CapsuleImmune modulation100.00100.00NP_391469
OPHIPIDH_2396576397757capB0.0CapsuleImmune modulation100.00100.00NP_391471
OPHIPIDH_2397772398221capC0.0CapsuleImmune modulation100.00100.00NP_391470
OPHIPIDH_111676841169447dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
OPHIPIDH_2804907805692dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
OPHIPIDH_2808590809528dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
OPHIPIDH_2805718806914dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
OPHIPIDH_2806943808562dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
OPHIPIDH_2809548816684dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
OPHIPIDH_1878183878824hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OPHIPIDH_62820827072tufA0.0elongation factor Tu84.9695.69AHM69299
OPHIPIDH_843925261pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OPHIPIDH_114840051483229CodY1.80e-124nutrient-responsive regulator81.08100.00ACJ80679
OPHIPIDH_2550969550400ClpP5.52e-99part of proteolytic complex81.0597.44BAB94595
OPHIPIDH_119464301946038spxA15.34e-69redox-responsive transcription factor83.21100.00AAF21893
OPHIPIDH_72090021142SpoVG2.75e-38RNA-binding protein80.2579.41AAT02994
OPHIPIDH_37636876171CspA1.98e-31cold shock protein90.91100.00CAA62903