Genome ID：GCA_026805425.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	23	33	40.22

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PAPBEHOL_18	60223	61092	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
PAPBEHOL_26	9312	10121	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
PAPBEHOL_18	61092	61685	STER_RS06030	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
PAPBEHOL_18	61092	61685	STR_RS05880	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
PAPBEHOL_38	12986	14644	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
PAPBEHOL_26	7032	8087	STU_RS16235	0.0	Capsule	Immune modulation	99.62	100.00	WP_002948022
PAPBEHOL_13	20760	21599	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
PAPBEHOL_18	61092	61685	STU_RS15260	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226149
PAPBEHOL_10	68187	68918	STER_RS05315	0.0	Capsule	Immune modulation	99.32	100.00	WP_011681176
PAPBEHOL_26	8107	9312	STU_RS16240	0.0	Capsule	Immune modulation	99.25	100.00	WP_011226326
PAPBEHOL_26	11058	12206	STU_RS16255	0.0	Capsule	Immune modulation	99.22	100.00	WP_041828290
PAPBEHOL_26	10105	11061	STU_RS16250	0.0	Capsule	Immune modulation	99.16	100.00	WP_011226328
PAPBEHOL_26	5253	7035	STU_RS16230	0.0	Capsule	Immune modulation	99.10	99.89	WP_011226325
PAPBEHOL_10	68187	68918	STU_RS14645	0.0	Capsule	Immune modulation	98.77	100.00	WP_011226048
PAPBEHOL_10	68187	68918	STR_RS05260	0.0	Capsule	Immune modulation	98.63	100.00	WP_011227248
PAPBEHOL_10	1269	2062	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.36	100.25	-
PAPBEHOL_10	66726	68186	STER_RS05320	0.0	Capsule	Immune modulation	98.29	100.00	WP_011681177
PAPBEHOL_18	25560	26321	srtA	0.0	Sortase A	Exoenzyme	97.64	100.00	-
PAPBEHOL_10	68927	69619	STU_RS14640	0.0	Capsule	Immune modulation	97.55	100.00	WP_011226047
PAPBEHOL_36	288072	288923	rfbD	0.0	Capsule	Immune modulation	97.30	100.00	WP_014621820
PAPBEHOL_10	68927	69619	STR_RS05255	0.0	Capsule	Immune modulation	97.26	100.00	WP_011227247
PAPBEHOL_10	69629	70369	STER_RS05305	0.0	Capsule	Immune modulation	97.03	100.00	WP_011681174
PAPBEHOL_10	69629	70369	STU_RS14635	0.0	Capsule	Immune modulation	96.90	100.00	WP_011226046
PAPBEHOL_10	66726	68186	STU_RS14650	0.0	Capsule	Immune modulation	96.85	100.21	WP_011226049
PAPBEHOL_10	69629	70364	STR_RS05250	0.0	Capsule	Immune modulation	96.47	98.13	WP_011227246
PAPBEHOL_10	66726	68186	STR_RS05265	0.0	Capsule	Immune modulation	95.89	100.21	WP_041827043
PAPBEHOL_10	70426	71793	STU_RS14630	0.0	Capsule	Immune modulation	95.03	99.93	WP_011226045
PAPBEHOL_10	70426	71791	STER_RS05300	0.0	Capsule	Immune modulation	94.59	99.78	WP_011681173
PAPBEHOL_10	68927	69619	STER_RS05310	0.0	Capsule	Immune modulation	90.62	100.00	WP_011681175
PAPBEHOL_6	229895	231198	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
PAPBEHOL_21	14241	15251	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.46	99.80	WP_002986042
PAPBEHOL_23	5357	6640	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
PAPBEHOL_18	62114	63160	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
PAPBEHOL_28	1270	1853	SPD_RS01775	4.97e-149	Capsule	Immune modulation	83.08	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PAPBEHOL_18	22873	21890	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.51	100.00	AAK75326
PAPBEHOL_39	27611	28684	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
PAPBEHOL_36	117266	114963	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
PAPBEHOL_6	147665	148633	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
PAPBEHOL_15	47432	48913	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
PAPBEHOL_3	6250	8496	metE	0.0	methionine biosynthesis enzymes	91.86	100.00	AAK74738
PAPBEHOL_13	40391	41389	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
PAPBEHOL_13	4278	5249	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
PAPBEHOL_36	238475	239626	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
PAPBEHOL_36	274900	276888	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
PAPBEHOL_18	39072	40802	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.39	100.00	AAK34199
PAPBEHOL_14	13994	15472	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
PAPBEHOL_6	229895	231196	Eno	0.0	enolase	86.21	99.77	ABP90468
PAPBEHOL_14	28731	30623	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.74	98.90	ABP91129
PAPBEHOL_3	11421	9712	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
PAPBEHOL_22	1996	986	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
PAPBEHOL_38	39932	38571	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
PAPBEHOL_9	30068	31960	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
PAPBEHOL_6	215459	216349	bglB	2.27e-179	putative phospho--glucosidase	88.89	99.66	AAK33487
PAPBEHOL_4	43973	44911	SP_0676	7.03e-169	transcription facot	81.15	97.20	AAK74821
PAPBEHOL_3	8688	9545	metF	2.34e-166	methionine biosynthesis enzymes	86.01	99.31	AAK74739
PAPBEHOL_10	29897	30601	covR	1.75e-132	responder protein	85.53	100.00	AAK71319
PAPBEHOL_15	28452	27781	rr01	1.55e-125	response regulator	83.93	99.56	CAB54566
PAPBEHOL_3	15376	16044	CiaR	8.05e-125	two-component response regulator	86.10	99.55	AAK74935
PAPBEHOL_10	29897	30601	walR	7.38e-123	DNA-binding response regulator	82.13	100.00	ANC99504
PAPBEHOL_3	15376	16047	ciaR	1.09e-122	two component system response regulator	83.93	99.12	AIK75708
PAPBEHOL_34	8296	7610	CovR	1.36e-119	serves to repress GAS virulence factor-encoding genes	81.22	100.00	ACE75886
PAPBEHOL_13	41665	42039	SpxA2	2.63e-71	transcriptional regulator	91.20	94.70	ERL21461
PAPBEHOL_38	51350	51751	SpxA1	1.42e-67	transcriptional regulator	80.60	100.00	ERL19273
PAPBEHOL_35	25610	25323	spr0479	3.01e-49	essential gene	86.46	98.97	AAK99283
PAPBEHOL_6	107465	107719	spr1327	4.72e-45	essential gene	95.29	100.00	AAL00131
PAPBEHOL_19	22111	21848	spr0175	1.46e-42	pathogenitcity related	84.09	100.00	AAK98979
PAPBEHOL_19	21284	21018	spr0177	3.20e-34	essential gene	84.27	88.12	AAK98981
PAPBEHOL_23	6798	7298	RopE (M5005_Spy_1611)	2.28e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
PAPBEHOL_36	117266	114969	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
PAPBEHOL_9	44527	45546	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451