Genome ID:GCA_026966445.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBBOCNLI_6 | 170401 | 171303 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| CBBOCNLI_9 | 99996 | 100730 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| CBBOCNLI_12 | 52223 | 54148 | tet(Q) | ARO:3000191 | tet(Q) | 97.19 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBBOCNLI_9 | 99996 | 100730 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | M15332 |
| CBBOCNLI_6 | 170401 | 171303 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | FR688022 |
| CBBOCNLI_12 | 52223 | 54148 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.30 | 100.00 | X58717 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBBOCNLI_6 | 170401 | 171300 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| CBBOCNLI_9 | 99996 | 100727 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.18 | 100.00 | WP_014387027.1 |
| CBBOCNLI_12 | 52223 | 54145 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.19 | 100.00 | WP_002560998.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||