Genome ID:GCA_027662045.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJFCJMGI_2 | 87361 | 88290 | Erm(52) | ARO:3007041 | Erm(52) | 100.00 | 100.00 | MW269959.1 |
| LJFCJMGI_18 | 18205 | 18942 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| LJFCJMGI_56 | 4773 | 6692 | tet(W) | ARO:3000194 | tet(W) | 99.06 | 100.00 | AJ222769.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LJFCJMGI_18 | 18205 | 18942 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | AF299292 |
| LJFCJMGI_56 | 4773 | 6692 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.58 | 100.00 | AJ427422 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LJFCJMGI_2 | 87361 | 88287 | erm(52) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(52) | EXACTX | 100.00 | 100.00 | WP_002571018.1 |
| LJFCJMGI_18 | 18208 | 18942 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_001038792.1 |
| LJFCJMGI_56 | 4776 | 6692 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.37 | 100.00 | WP_063856423.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||