Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMLNIBKM_32 | 15946 | 17919 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| AMLNIBKM_5 | 14472 | 15437 | CfxA5 | ARO:3003096 | CfxA5 | 100.00 | 100.00 | AY769934.1 |
| AMLNIBKM_50 | 1828 | 2988 | tet(X) | ARO:3000205 | tet(X) | 99.48 | 99.48 | M37699.1 |
| AMLNIBKM_52 | 1144 | 1968 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
| AMLNIBKM_52 | 141 | 941 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AMLNIBKM_52 | 1144 | 1968 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| AMLNIBKM_5 | 14472 | 15437 | cfxA5 | Unknown Beta-lactam | 100.00 | 100.00 | AY769934 |
| AMLNIBKM_32 | 15946 | 17871 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| AMLNIBKM_50 | 1822 | 2988 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| AMLNIBKM_52 | 141 | 941 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMLNIBKM_52 | 1147 | 1968 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| AMLNIBKM_5 | 14472 | 15434 | cfxA5 | broad-spectrum class A beta-lactamase CfxA5 | EXACTX | 100.00 | 100.00 | WP_032946415.1 |
| AMLNIBKM_50 | 1822 | 2985 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| AMLNIBKM_32 | 15949 | 17871 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| AMLNIBKM_52 | 141 | 938 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AMLNIBKM_1 | 351016 | 349436 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |