Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HOKCLFBP_1 | 343162 | 345087 | tet(Q) | ARO:3000191 | tet(Q) | 99.84 | 97.56 | Z21523.1 |
| HOKCLFBP_10 | 127642 | 128847 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| HOKCLFBP_10 | 105691 | 106593 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| HOKCLFBP_3 | 1 | 1650 | tet(Q) | ARO:3000191 | tet(Q) | 95.26 | 83.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HOKCLFBP_1 | 343162 | 345087 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | Z21523 |
| HOKCLFBP_10 | 105691 | 106593 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
| HOKCLFBP_70 | 177 | 891 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.44 | 89.26 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HOKCLFBP_10 | 105694 | 106593 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| HOKCLFBP_10 | 128872 | 129381 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| HOKCLFBP_1 | 343162 | 345084 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.84 | 100.00 | WP_002560998.1 |
| HOKCLFBP_70 | 177 | 890 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 99.58 | 89.47 | WP_002682030.1 |
| HOKCLFBP_10 | 127642 | 128844 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| HOKCLFBP_3 | 1 | 1647 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 98.36 | 85.65 | WP_063856409.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||