Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPDFHGKP_6 | 1146 | 3071 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| OPDFHGKP_6 | 2 | 859 | ErmF | ARO:3000498 | ErmF | 98.50 | 107.14 | M17124.1 |
| OPDFHGKP_21 | 1 | 1917 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 97.11 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OPDFHGKP_21 | 1 | 1917 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.53 | L33696 |
| OPDFHGKP_6 | 59 | 859 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPDFHGKP_21 | 1 | 1914 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 99.53 | WP_063856407.1 |
| OPDFHGKP_6 | 59 | 856 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| OPDFHGKP_6 | 1146 | 3068 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OPDFHGKP_1 | 681735 | 683315 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.72 | 96.70 | BAA04222 |