Genome ID:GCA_027942375.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3234.69

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FMDNCBBD_1466810467856clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FMDNCBBD_1466810467853cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9099.33KR610408
FMDNCBBD_125105212511897tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.36100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FMDNCBBD_1466810467853clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
FMDNCBBD_125105272511897tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.0999.78WP_003242953.1
FMDNCBBD_1464541465059satAstreptothricin N-acetyltransferase SatABLASTX82.66100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FMDNCBBD_133761403377321capB0.0CapsuleImmune modulation81.8799.66NP_391471
FMDNCBBD_133756763376125capC1.45e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FMDNCBBD_19393995075tufA0.0elongation factor Tu86.5495.69AHM69299
FMDNCBBD_138817543882623pdxS1.53e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
FMDNCBBD_115419131542689CodY3.23e-124nutrient-responsive regulator81.08100.00ACJ80679