Genome ID:GCA_027947315.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
0263241.23

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GGEMHDLO_11101312068STU_RS162350.0CapsuleImmune modulation100.00100.00WP_002948022
GGEMHDLO_11329314102STU_RS162450.0CapsuleImmune modulation100.00100.00WP_002948020
GGEMHDLO_1923211016STU_RS162300.0CapsuleImmune modulation99.94100.00WP_011226325
GGEMHDLO_11208813293STU_RS162400.0CapsuleImmune modulation99.83100.00WP_011226326
GGEMHDLO_11408615042STU_RS162500.0CapsuleImmune modulation99.79100.00WP_011226328
GGEMHDLO_126117661769STR_RS058800.0CapsuleImmune modulation99.66100.00WP_011226149
GGEMHDLO_11503916187STU_RS162550.0CapsuleImmune modulation99.65100.00WP_041828290
GGEMHDLO_126117661769STER_RS060300.0CapsuleImmune modulation99.50100.00WP_011226149
GGEMHDLO_1792249823STR_RS052450.0CapsuleImmune modulation99.50100.00WP_196767671
GGEMHDLO_126117661769STU_RS152600.0CapsuleImmune modulation99.50100.00WP_011226149
GGEMHDLO_348905690714fbp540.0FBPsAdherence99.46100.00WP_011227179
GGEMHDLO_3211369STR_RS052650.0CapsuleImmune modulation99.2094.09WP_041827043
GGEMHDLO_12105804106594cshA0.0Cell surface hydrophobicity proteinsAdherence99.11100.00-
GGEMHDLO_126030761176rfbA0.0CapsuleImmune modulation99.08100.00WP_011681286
GGEMHDLO_17997410709STER_RS053050.0CapsuleImmune modulation99.0599.33WP_011681174
GGEMHDLO_122564726408srtA0.0Sortase AExoenzyme98.95100.00-
GGEMHDLO_17996010709STR_RS052500.0CapsuleImmune modulation98.93100.00WP_011227246
GGEMHDLO_171142012029STR_RS052600.0CapsuleImmune modulation98.8583.33WP_011227248
GGEMHDLO_11884620120STU_RS162650.0CapsuleImmune modulation98.82100.00WP_011226331
GGEMHDLO_11788418846STU_RS162600.0CapsuleImmune modulation98.7595.25WP_011226330
GGEMHDLO_171142012029STU_RS146450.0CapsuleImmune modulation98.6983.33WP_011226048
GGEMHDLO_383951340481cbpD0.0AutolysinExoenzyme98.56100.00WP_082302295
GGEMHDLO_17997410709STU_RS146350.0CapsuleImmune modulation98.3799.33WP_011226046
GGEMHDLO_1781009059STR_RS052400.0CapsuleImmune modulation98.23100.00WP_041827042
GGEMHDLO_171142012029STER_RS053150.0CapsuleImmune modulation98.2083.33WP_011681176
GGEMHDLO_3211369STU_RS146500.0CapsuleImmune modulation98.1794.09WP_011226049
GGEMHDLO_171071911411STR_RS052550.0CapsuleImmune modulation97.69100.00WP_011227247
GGEMHDLO_171071911411STU_RS146400.0CapsuleImmune modulation97.69100.00WP_011226047
GGEMHDLO_3211369STER_RS053200.0CapsuleImmune modulation96.8093.91WP_011681177
GGEMHDLO_12122122072rfbD0.0CapsuleImmune modulation96.24100.00WP_014621820
GGEMHDLO_171071911411STER_RS053100.0CapsuleImmune modulation90.91100.00WP_011681175
GGEMHDLO_23106041107344eno0.0Streptococcal enolaseExoenzyme88.1099.46WP_000022832
GGEMHDLO_161425815268plr/gapA0.0Streptococcal plasmin receptor/GAPDHAdherence86.8299.51WP_002986042
GGEMHDLO_220473330tig/ropA0.0Trigger factorStress survival80.5899.77WP_000107753
GGEMHDLO_126219863244rfbB0.0CapsuleImmune modulation80.33100.00WP_009659423
GGEMHDLO_2422132796SPD_RS017752.83e-149CapsuleImmune modulation83.0896.20WP_001819836

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GGEMHDLO_122296021977ldh(Sp_1220)0.0L-lactate dehydrogenase94.82100.00AAK75326
GGEMHDLO_141374912676MntE0.0manganese homeostasis94.4199.72ABF32167
GGEMHDLO_1177203179506pfl2(Sp_0459)0.0formate acetyltransferase92.9799.22AAK74619
GGEMHDLO_232484625814spr00840.0pathogenitcity related92.8898.48AAK98888
GGEMHDLO_412986531346SPD_03100.0UPF0371 protein SPD_031092.11100.00ABJ54480
GGEMHDLO_82761625370metE0.0methionine biosynthesis enzymes91.72100.00AAK74738
GGEMHDLO_73697037968recA0.0DNA recombination and repair91.2985.82AAL00560
GGEMHDLO_71957prsA20.0ribose-phosphate pyrophosphokinase90.6098.46ABF36968
GGEMHDLO_16327962128potA0.0ABC transporter ATP-binding protein-spermidine/putrescine transport89.0699.74AAL00050
GGEMHDLO_13527933291uvrB0.0excinuclease ABC, B subunit88.84100.00AE014259_2
GGEMHDLO_123915640886ptsI0.0phosphoenolpyruvate-protein phosphotransferase87.69100.00AAK34199
GGEMHDLO_405618954711IMPDH0.0inosine-5'-monophosphate dehydrogenase87.42100.00ADE32434
GGEMHDLO_23106041107342Eno0.0enolase86.2199.77ABP90468
GGEMHDLO_404099339101gidA0.0tRNA uridine 5-carboxymethylaminomethyl modification enzyme86.0598.90ABP91129
GGEMHDLO_82244524154PGM0.0phosphoglucomutase83.8999.65ACH87041
GGEMHDLO_395667355663pdh0.0pyruvate dehydrogenase83.3899.70ABP91006
GGEMHDLO_346453465895mnmE0.0central tRNA-modifying GTPase82.2499.56ABP90420
GGEMHDLO_239160292492bglB4.78e-179putative phospho--glucosidase88.5599.66AAK33487
GGEMHDLO_44076241697SP_06762.06e-169transcription facot81.7396.89AAK74821
GGEMHDLO_82517824321metF1.37e-165methionine biosynthesis enzymes86.0199.31AAK74739
GGEMHDLO_12138258138962covR9.34e-132responder protein85.11100.00AAK71319
GGEMHDLO_4152794608rr014.29e-124response regulator83.0499.56CAB54566
GGEMHDLO_12138258138962walR4.68e-122DNA-binding response regulator81.28100.00ANC99504
GGEMHDLO_81849117823CiaR1.25e-121two-component response regulator85.6599.55AAK74935
GGEMHDLO_81849117820ciaR1.52e-119two component system response regulator83.4899.12AIK75708
GGEMHDLO_378363584321CovR5.06e-119serves to repress GAS virulence factor-encoding genes80.79100.00ACE75886
GGEMHDLO_73824438618SpxA22.41e-71transcriptional regulator91.2094.70ERL21461
GGEMHDLO_345317552774SpxA12.10e-67transcriptional regulator80.60100.00ERL19273
GGEMHDLO_62534125054spr04793.06e-49essential gene86.4698.97AAK99283
GGEMHDLO_388136081614spr13271.36e-45essential gene95.29100.00AAL00131
GGEMHDLO_4073707633spr01754.00e-42pathogenitcity related84.09100.00AAK98979
GGEMHDLO_4081978463spr01777.06e-34essential gene84.2788.12AAK98981
GGEMHDLO_234883988RopE (M5005_Spy_1611)1.80e-76probable DNA-directed RNA polymerase subunit delta81.4487.43AAK34603
GGEMHDLO_1177203179500PFL (B9H01_RS01125)0.0formate C-acetyltransferase82.8198.08MYN69560
GGEMHDLO_391912820147ilvC (SPD_0406)0.0ketol-acid reductoisomerase (NADP(+))96.18100.00ABJ55451