Genome ID：GCA_028325745.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
2	22	35	41.39

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JGLKIJCE_11	210601	211818	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
JGLKIJCE_11	211938	213401	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JGLKIJCE_11	210601	211815	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
JGLKIJCE_11	211938	213398	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JGLKIJCE_29	128563	129414	rfbD	0.0	Capsule	Immune modulation	95.07	100.00	WP_014621820
JGLKIJCE_2	35843	36583	STER_RS05305	0.0	Capsule	Immune modulation	94.87	100.00	WP_011681174
JGLKIJCE_2	35843	36583	STU_RS14635	0.0	Capsule	Immune modulation	94.33	100.00	WP_011226046
JGLKIJCE_2	36640	38007	STU_RS14630	0.0	Capsule	Immune modulation	93.93	100.00	WP_011226045
JGLKIJCE_2	35843	36578	STR_RS05250	0.0	Capsule	Immune modulation	93.89	98.13	WP_011227246
JGLKIJCE_29	130515	131786	STU_RS16265	0.0	Capsule	Immune modulation	93.79	99.76	WP_011226331
JGLKIJCE_2	32940	34400	STER_RS05320	0.0	Capsule	Immune modulation	93.71	99.93	WP_011681177
JGLKIJCE_2	32940	34400	STU_RS14650	0.0	Capsule	Immune modulation	93.63	100.14	WP_011226049
JGLKIJCE_2	36640	38005	STER_RS05300	0.0	Capsule	Immune modulation	93.63	99.85	WP_011681173
JGLKIJCE_2	32940	34400	STR_RS05265	0.0	Capsule	Immune modulation	92.88	100.14	WP_041827043
JGLKIJCE_29	139629	141413	STU_RS16230	0.0	Capsule	Immune modulation	92.72	100.00	WP_011226325
JGLKIJCE_29	137361	138566	STU_RS16240	0.0	Capsule	Immune modulation	92.62	100.00	WP_011226326
JGLKIJCE_29	135612	136568	STU_RS16250	0.0	Capsule	Immune modulation	92.48	100.00	WP_011226328
JGLKIJCE_29	134467	135615	STU_RS16255	0.0	Capsule	Immune modulation	92.34	100.00	WP_041828290
JGLKIJCE_29	136552	137361	STU_RS16245	0.0	Capsule	Immune modulation	92.23	99.88	WP_002948020
JGLKIJCE_2	34401	35132	STU_RS14645	0.0	Capsule	Immune modulation	91.67	100.00	WP_011226048
JGLKIJCE_29	138586	139632	STU_RS16235	0.0	Capsule	Immune modulation	91.57	99.43	WP_002948022
JGLKIJCE_30	85343	86212	rfbA	0.0	Capsule	Immune modulation	91.49	100.00	WP_011681286
JGLKIJCE_2	34401	35132	STER_RS05315	0.0	Capsule	Immune modulation	91.26	100.00	WP_011681176
JGLKIJCE_22	66965	68622	fbp54	0.0	FBPs	Adherence	91.20	99.88	WP_011227179
JGLKIJCE_30	86212	86805	STR_RS05880	0.0	Capsule	Immune modulation	90.74	100.00	WP_011226149
JGLKIJCE_2	34401	35132	STR_RS05260	0.0	Capsule	Immune modulation	90.71	100.00	WP_011227248
JGLKIJCE_30	86212	86805	STER_RS06030	0.0	Capsule	Immune modulation	90.57	100.00	WP_011226149
JGLKIJCE_30	86212	86805	STU_RS15260	0.0	Capsule	Immune modulation	90.57	100.00	WP_011226149
JGLKIJCE_2	35141	35833	STR_RS05255	0.0	Capsule	Immune modulation	88.62	99.86	WP_011227247
JGLKIJCE_2	35141	35833	STU_RS14640	0.0	Capsule	Immune modulation	88.62	99.86	WP_011226047
JGLKIJCE_31	14806	15816	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.45	99.80	WP_002986042
JGLKIJCE_2	72692	73597	cbpD	0.0	Autolysin	Exoenzyme	88.19	93.50	WP_082302295
JGLKIJCE_2	35141	35833	STER_RS05310	0.0	Capsule	Immune modulation	87.46	99.86	WP_011681175
JGLKIJCE_11	185240	186543	eno	0.0	Streptococcal enolase	Exoenzyme	87.25	99.54	WP_000022832
JGLKIJCE_22	205576	206337	srtA	0.0	Sortase A	Exoenzyme	84.67	99.87	-
JGLKIJCE_7	16989	18272	tig/ropA	0.0	Trigger factor	Stress survival	80.61	99.61	WP_000107753
JGLKIJCE_30	87009	88055	rfbB	0.0	Capsule	Immune modulation	80.33	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JGLKIJCE_22	197441	196368	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
JGLKIJCE_22	209026	210009	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.04	100.00	AAK75326
JGLKIJCE_31	141622	139316	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
JGLKIJCE_35	43985	45466	SPD_0310	0.0	UPF0371 protein SPD_0310	93.12	100.00	ABJ54480
JGLKIJCE_22	178381	176135	metE	0.0	methionine biosynthesis enzymes	92.52	100.00	AAK74738
JGLKIJCE_11	95412	96380	spr0084	0.0	pathogenitcity related	92.26	98.48	AAK98888
JGLKIJCE_4	37410	36439	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
JGLKIJCE_22	268419	261856	PrtA	0.0	serine protease	90.05	101.96	ABJ55268
JGLKIJCE_30	59956	61686	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
JGLKIJCE_29	87919	89070	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
JGLKIJCE_29	116519	118507	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
JGLKIJCE_32	176152	174674	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
JGLKIJCE_11	185240	186541	Eno	0.0	enolase	86.44	99.77	ABP90468
JGLKIJCE_32	160794	158902	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
JGLKIJCE_22	173216	174925	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
JGLKIJCE_4	2093	1002	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
JGLKIJCE_32	28541	29551	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
JGLKIJCE_22	41194	42555	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
JGLKIJCE_11	170833	171723	bglB	3.68e-178	putative phospho--glucosidase	87.88	99.66	AAK33487
JGLKIJCE_22	132525	133475	SP_0676	3.39e-170	transcription facot	81.39	98.45	AAK74821
JGLKIJCE_22	175948	175091	metF	6.89e-169	methionine biosynthesis enzymes	87.76	99.31	AAK74739
JGLKIJCE_15	5909	5238	rr01	2.29e-128	response regulator	84.82	99.56	CAB54566
JGLKIJCE_30	208420	209124	covR	1.02e-126	responder protein	85.53	100.00	AAK71319
JGLKIJCE_22	169249	168578	ciaR	2.62e-125	two component system response regulator	86.16	99.12	AIK75708
JGLKIJCE_22	169249	168581	CiaR	4.84e-125	two-component response regulator	87.44	99.55	AAK74935
JGLKIJCE_30	208420	209124	walR	2.32e-120	DNA-binding response regulator	82.13	100.00	ANC99504
JGLKIJCE_33	53932	53246	CovR	3.86e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
JGLKIJCE_4	827	432	SpxA2	4.09e-76	transcriptional regulator	91.67	100.00	ERL21461
JGLKIJCE_22	29728	29327	SpxA1	5.61e-70	transcriptional regulator	82.84	100.00	ERL19273
JGLKIJCE_10	10261	10674	GrpE	1.29e-68	protein grpE	81.88	80.59	ABP89267
JGLKIJCE_33	30724	30437	spr0479	3.74e-48	essential gene	85.42	98.97	AAK99283
JGLKIJCE_11	56616	56870	spr1327	1.28e-44	essential gene	92.94	100.00	AAL00131
JGLKIJCE_32	117498	117761	spr0175	9.46e-43	pathogenitcity related	85.23	100.00	AAK98979
JGLKIJCE_32	118322	118588	spr0177	2.10e-41	essential gene	83.15	88.12	AAK98981
JGLKIJCE_34	51881	51744	srtA	2.01e-17	sortase	82.61	100.00	AAK33966
JGLKIJCE_7	16822	16331	RopE (M5005_Spy_1611)	9.60e-74	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
JGLKIJCE_31	141622	139322	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
JGLKIJCE_32	64964	63945	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451