Genome ID：GCA_028325785.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
3	14	33	35.97

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PINKJGLB_2	25555	27474	tet(M)	ARO:3000186	tet(M)	99.37	100.00	AB039845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PINKJGLB_11	310290	311507	mef(A)	Erythromycin, Azithromycin	100.00	100.00	U83667
PINKJGLB_11	311627	313090	msr(D)	Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	AF274302
PINKJGLB_2	25555	27474	tet(M)	Doxycycline, Tetracycline, Minocycline	99.90	100.00	X75073

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PINKJGLB_11	310290	311504	mef(A)	macrolide efflux MFS transporter Mef(A)	EXACTX	100.00	100.00	WP_000417519.1
PINKJGLB_11	311627	313087	msr(D)	ABC-F type ribosomal protection protein Msr(D)	EXACTX	100.00	100.00	WP_000420313.1
PINKJGLB_2	25558	27474	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	EXACTX	100.00	100.00	WP_000691727.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PINKJGLB_36	88702	89417	STER_RS07085	0.0	Capsule	Immune modulation	96.93	99.86	WP_011681442
PINKJGLB_36	87732	88700	STER_RS07090	0.0	Capsule	Immune modulation	95.77	100.00	WP_011681443
PINKJGLB_36	84541	85392	rfbD	0.0	Capsule	Immune modulation	95.19	100.00	WP_014621820
PINKJGLB_36	89763	90539	STER_RS07075	0.0	Capsule	Immune modulation	92.53	100.00	WP_011681440
PINKJGLB_36	85511	86764	STER_RS07100	0.0	Capsule	Immune modulation	92.51	99.52	WP_011681445
PINKJGLB_3	9117	9710	STR_RS05880	0.0	Capsule	Immune modulation	92.09	100.00	WP_011226149
PINKJGLB_3	9117	9710	STER_RS06030	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
PINKJGLB_3	9117	9710	STU_RS15260	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
PINKJGLB_3	9710	10579	rfbA	0.0	Capsule	Immune modulation	91.26	100.00	WP_011681286
PINKJGLB_38	63575	65233	fbp54	0.0	FBPs	Adherence	90.30	99.94	WP_011227179
PINKJGLB_13	501	1511	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.45	99.80	WP_002986042
PINKJGLB_11	281216	282519	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
PINKJGLB_11	91044	91934	cbpD	0.0	Autolysin	Exoenzyme	87.75	93.29	WP_082302295
PINKJGLB_6	25338	26099	srtA	0.0	Sortase A	Exoenzyme	84.53	99.87	-
PINKJGLB_3	7868	8914	rfbB	0.0	Capsule	Immune modulation	81.22	99.90	WP_009659423
PINKJGLB_33	211353	212636	tig/ropA	0.0	Trigger factor	Stress survival	80.84	99.61	WP_000107753

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PINKJGLB_6	22649	21675	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.31	99.09	AAK75326
PINKJGLB_6	34237	35310	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
PINKJGLB_9	30866	28560	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
PINKJGLB_40	45518	46999	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
PINKJGLB_11	190742	191710	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
PINKJGLB_1	55519	53273	metE	0.0	methionine biosynthesis enzymes	92.12	100.00	AAK74738
PINKJGLB_7	3541	4512	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
PINKJGLB_3	35963	34233	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
PINKJGLB_36	43780	44928	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.82	99.48	AAL00050
PINKJGLB_36	72133	74121	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
PINKJGLB_22	199445	197967	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
PINKJGLB_11	281216	282517	Eno	0.0	enolase	86.44	99.77	ABP90468
PINKJGLB_22	184072	182180	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
PINKJGLB_1	50354	52063	PGM	0.0	phosphoglucomutase	85.11	99.65	ACH87041
PINKJGLB_7	37478	38569	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
PINKJGLB_22	50057	51067	pdh	0.0	pyruvate dehydrogenase	83.38	99.70	ABP91006
PINKJGLB_38	79009	77648	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
PINKJGLB_11	266795	267685	bglB	2.11e-177	putative phospho--glucosidase	87.54	99.66	AAK33487
PINKJGLB_1	6383	7321	SP_0676	5.40e-170	transcription facot	81.79	97.20	AAK74821
PINKJGLB_1	53086	52229	metF	1.59e-169	methionine biosynthesis enzymes	87.76	99.31	AAK74739
PINKJGLB_12	9171	9842	rr01	1.78e-127	response regulator	84.38	99.56	CAB54566
PINKJGLB_37	113355	114059	covR	7.01e-127	responder protein	85.53	100.00	AAK71319
PINKJGLB_1	46387	45716	ciaR	6.07e-126	two component system response regulator	86.16	99.12	AIK75708
PINKJGLB_1	46387	45719	CiaR	1.12e-125	two-component response regulator	87.44	99.55	AAK74935
PINKJGLB_37	113355	114059	walR	1.59e-120	DNA-binding response regulator	82.13	100.00	ANC99504
PINKJGLB_33	63301	62615	CovR	4.68e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
PINKJGLB_7	38743	39138	SpxA2	3.86e-76	transcriptional regulator	91.67	100.00	ERL21461
PINKJGLB_38	90480	90881	SpxA1	2.41e-70	transcriptional regulator	82.84	100.00	ERL19273
PINKJGLB_5	6741	6328	GrpE	3.84e-68	protein grpE	81.88	80.59	ABP89267
PINKJGLB_33	30612	30325	spr0479	5.67e-48	essential gene	85.42	98.97	AAK99283
PINKJGLB_11	146751	147005	spr1327	1.67e-44	essential gene	92.94	100.00	AAL00131
PINKJGLB_22	142514	142777	spr0175	1.16e-42	pathogenitcity related	85.23	100.00	AAK98979
PINKJGLB_22	143338	143604	spr0177	2.59e-41	essential gene	83.15	88.12	AAK98981
PINKJGLB_33	211186	210695	RopE (M5005_Spy_1611)	1.04e-72	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
PINKJGLB_9	30866	28566	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.09	98.08	MYN69560
PINKJGLB_22	86471	85452	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451