Genome ID:GCA_028325845.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
0163639.40

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LMJDKBLN_31719117922STR_RS052600.0CapsuleImmune modulation94.54100.00WP_011227248
LMJDKBLN_4547215572rfbD0.0CapsuleImmune modulation94.48100.00WP_014621820
LMJDKBLN_4512801996STER_RS070850.0CapsuleImmune modulation94.42100.00WP_011681442
LMJDKBLN_31719117922STU_RS146450.0CapsuleImmune modulation93.85100.00WP_011226048
LMJDKBLN_31719117922STER_RS053150.0CapsuleImmune modulation93.58100.00WP_011681176
LMJDKBLN_45164934STER_RS070750.0CapsuleImmune modulation92.4899.23WP_011681440
LMJDKBLN_31573017190STER_RS053200.0CapsuleImmune modulation91.2699.86WP_011681177
LMJDKBLN_229303493627STR_RS058800.0CapsuleImmune modulation91.08100.00WP_011226149
LMJDKBLN_229303493627STER_RS060300.0CapsuleImmune modulation90.91100.00WP_011226149
LMJDKBLN_229303493627STU_RS152600.0CapsuleImmune modulation90.91100.00WP_011226149
LMJDKBLN_31573017190STU_RS146500.0CapsuleImmune modulation90.65100.00WP_011226049
LMJDKBLN_112138523042fbp540.0FBPsAdherence90.3699.88WP_011227179
LMJDKBLN_31573017190STR_RS052650.0CapsuleImmune modulation89.97100.00WP_041827043
LMJDKBLN_31793118623STU_RS146400.0CapsuleImmune modulation89.90100.00WP_011226047
LMJDKBLN_31793118623STR_RS052550.0CapsuleImmune modulation89.61100.00WP_011227247
LMJDKBLN_31793118623STER_RS053100.0CapsuleImmune modulation89.47100.00WP_011681175
LMJDKBLN_459219193030cbpD0.0AutolysinExoenzyme89.0699.88WP_011226733
LMJDKBLN_473829539598eno0.0Streptococcal enolaseExoenzyme87.2599.54WP_000022832
LMJDKBLN_43679237802plr/gapA0.0Streptococcal plasmin receptor/GAPDHAdherence86.2899.80WP_002986042
LMJDKBLN_11176473177234srtA0.0Sortase AExoenzyme83.8899.87-
LMJDKBLN_229171892764rfbB0.0CapsuleImmune modulation83.5999.90WP_002263087
LMJDKBLN_3317853068tig/ropA0.0Trigger factorStress survival80.6899.61WP_000107753
LMJDKBLN_229362794496rfbA0.0CapsuleImmune modulation80.2899.77WP_002904719
LMJDKBLN_31863319303STU_RS146357.83e-150CapsuleImmune modulation81.1390.28WP_011226046
LMJDKBLN_31863319303STER_RS053053.65e-148CapsuleImmune modulation80.9890.28WP_011681174
LMJDKBLN_31863319303STR_RS052503.70e-138CapsuleImmune modulation80.0989.20WP_011227246

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LMJDKBLN_11179924180907ldh(Sp_1220)0.0L-lactate dehydrogenase96.95100.00AAK75326
LMJDKBLN_11168335167262MntE0.0manganese homeostasis96.0999.72ABF32167
LMJDKBLN_43151931154237pfl2(Sp_0459)0.0formate acetyltransferase94.4199.22AAK74619
LMJDKBLN_11321915323396SPD_03100.0UPF0371 protein SPD_031093.12100.00ABJ54480
LMJDKBLN_53681335845spr00840.0pathogenitcity related92.8898.48AAK98888
LMJDKBLN_11148216145970metE0.0methionine biosynthesis enzymes92.66100.00AAK74738
LMJDKBLN_82552224551prsA20.0ribose-phosphate pyrophosphokinase91.67100.00ABF36968
LMJDKBLN_11239106232633PrtA0.0serine protease91.30100.61ABJ55268
LMJDKBLN_22119872118142ptsI0.0phosphoenolpyruvate-protein phosphotransferase90.12100.00AAK34199
LMJDKBLN_451927417286uvrB0.0excinuclease ABC, B subunit89.59100.00AE014259_2
LMJDKBLN_432242421273potA0.0ABC transporter ATP-binding protein-spermidine/putrescine transport89.5899.74AAL00050
LMJDKBLN_25436552887IMPDH0.0inosine-5'-monophosphate dehydrogenase87.83100.00ADE32434
LMJDKBLN_473959838297Eno0.0enolase86.4499.77ABP90468
LMJDKBLN_23858536693gidA0.0tRNA uridine 5-carboxymethylaminomethyl modification enzyme85.4298.90ABP91129
LMJDKBLN_11143052144761PGM0.0phosphoglucomutase84.7699.65ACH87041
LMJDKBLN_181259213683recA0.0DNA recombination and repair84.6495.36AAL00560
LMJDKBLN_462981430824pdh0.0pyruvate dehydrogenase83.0999.70ABP91006
LMJDKBLN_1158227183mnmE0.0central tRNA-modifying GTPase82.8999.56ABP90420
LMJDKBLN_475400553115bglB1.02e-177putative phospho--glucosidase87.2099.66AAK33487
LMJDKBLN_11145780144923metF1.12e-169methionine biosynthesis enzymes87.7699.31AAK74739
LMJDKBLN_11101489102439SP_06761.62e-169transcription facot81.3998.45AAK74821
LMJDKBLN_22156757157614mtsA6.61e-152substrate-binding lipoprotein of manganese transporter80.4992.86AIK76191
LMJDKBLN_4555724751GacA4.00e-148dTDP-4-dehydrorhamnose reductas80.6696.48AAZ51220
LMJDKBLN_2439033199covR1.38e-128responder protein85.53100.00AAK71319
LMJDKBLN_11260925260254rr017.24e-127response regulator84.8299.56CAB54566
LMJDKBLN_11138375137704ciaR3.23e-125two component system response regulator86.1699.12AIK75708
LMJDKBLN_11138375137707CiaR5.98e-125two-component response regulator87.4499.55AAK74935
LMJDKBLN_2439033199walR4.03e-122DNA-binding response regulator82.13100.00ANC99504
LMJDKBLN_33156929157615CovR1.62e-120serves to repress GAS virulence factor-encoding genes82.10100.00ACE75886
LMJDKBLN_181385614251SpxA21.41e-76transcriptional regulator91.67100.00ERL21461
LMJDKBLN_92420023799SpxA11.90e-70transcriptional regulator82.09100.00ERL19273
LMJDKBLN_662375851GrpE1.16e-64protein grpE82.9575.29ABP89267
LMJDKBLN_33180133180420spr04795.12e-48essential gene85.4298.97AAK99283
LMJDKBLN_151707617330spr13279.04e-46essential gene92.94100.00AAL00131
LMJDKBLN_274127675spr01753.18e-43pathogenitcity related85.23100.00AAK98979
LMJDKBLN_282378503spr01777.07e-42essential gene83.1588.12AAK98981
LMJDKBLN_3332353726RopE (M5005_Spy_1611)9.36e-73probable DNA-directed RNA polymerase subunit delta82.9385.86AAK34603
LMJDKBLN_43151931154231PFL (B9H01_RS01125)0.0formate C-acetyltransferase83.2298.08MYN69560
LMJDKBLN_466595464935ilvC (SPD_0406)0.0ketol-acid reductoisomerase (NADP(+))85.88100.00ABJ55451