Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNHMNCOO_214 | 4993 | 6966 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNHMNCOO_214 | 4993 | 6918 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| FNHMNCOO_63 | 1 | 739 | cfxA3 | Ampicillin | 85.12 | 76.40 | AF472622 |
| FNHMNCOO_63 | 1 | 739 | cfxA4 | Unknown Beta-lactam | 85.12 | 76.40 | AY769933 |
| FNHMNCOO_63 | 1 | 739 | cfxA5 | Unknown Beta-lactam | 85.12 | 76.40 | AY769934 |
| FNHMNCOO_63 | 1 | 739 | cfxA | Cefoxitin, Ampicillin | 85.12 | 76.40 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNHMNCOO_214 | 4996 | 6918 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| FNHMNCOO_63 | 1 | 741 | cfxA | CfxA family broad-spectrum class A beta-lactamase | PARTIAL_CONTIG_ENDX | 82.59 | 76.95 | WP_004339683.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNHMNCOO_26 | 1873 | 293 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |