Genome ID:GCA_028329115.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4014.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LLOCDOJJ_121601617941tet(Q)ARO:3000191tet(Q)96.4197.56Z21523.1
LLOCDOJJ_328621827CfxA2ARO:3003002CfxA2100.00100.00AF118110.1
LLOCDOJJ_23113907ErmFARO:3000498ErmF97.3799.25M17124.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LLOCDOJJ_121601617941tet(Q)Doxycycline, Tetracycline, Minocycline99.84100.00L33696
LLOCDOJJ_328621827cfxA3Ampicillin99.79100.00AF472622
LLOCDOJJ_328621827cfxA4Unknown Beta-lactam99.79100.00AY769933
LLOCDOJJ_328621827cfxA5Unknown Beta-lactam99.79100.00AY769934
LLOCDOJJ_328621827cfxACefoxitin, Ampicillin99.79100.00U38243
LLOCDOJJ_23113907erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S98.6399.25M17808

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LLOCDOJJ_328621821cfxACfxA family broad-spectrum class A beta-lactamaseBLASTX100.0099.69WP_004339683.1
LLOCDOJJ_121601917941tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX99.53100.00WP_063856407.1
LLOCDOJJ_2311201959estTmacrolide hydrolase EstTBLASTX98.58100.00WP_185148407.1
LLOCDOJJ_23113904erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX97.74100.00WP_002682030.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LLOCDOJJ_33172490170910GroEL0.0folding of newly synthesized proteins, preventing misfolding and aggregation86.9196.70BAA04222