Genome ID:GCA_028398715.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
5005.00

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GIHHDPPA_1962019020990ErmFARO:3000498ErmF97.74100.00M17124.1
GIHHDPPA_181064612571tet(Q)ARO:3000191tet(Q)96.4197.56Z21523.1
GIHHDPPA_3482339198CfxA3ARO:3003003CfxA3100.00100.00AF472622.2
GIHHDPPA_6681939398Mef(En2)ARO:3004659Mef(En2)99.50100.00AF251288.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GIHHDPPA_3482339198cfxA3Ampicillin100.00100.00AF472622
GIHHDPPA_1962019020990erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.88100.00M62487
GIHHDPPA_181064612571tet(Q)Doxycycline, Tetracycline, Minocycline99.84100.00L33696

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GIHHDPPA_3482369198cfxA3extended-spectrum class A beta-lactamase CfxA3EXACTX100.00100.00WP_004348227.1
GIHHDPPA_6694239932lnu(AN2)lincosamide nucleotidyltransferase Lnu(AN2)EXACTX100.00100.00WP_004308783.1
GIHHDPPA_1962019320990erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX99.62100.00WP_063844771.1
GIHHDPPA_181064912571tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX99.53100.00WP_063856407.1
GIHHDPPA_6681939395mef(En2)macrolide efflux MFS transporter Mef(En2)BLASTX99.50100.00WP_063853729.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found