Genome ID:GCA_028402285.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LNIIHHEB_51 | 211842 | 213788 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 98.63 | Z21523.1 |
| LNIIHHEB_9 | 4006 | 4806 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| LNIIHHEB_9 | 2657 | 3793 | tet(X4) | ARO:3004720 | tet(X4) | 89.95 | 98.18 | MK134376.1 |
| LNIIHHEB_9 | 1613 | 2476 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LNIIHHEB_9 | 4006 | 4806 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| LNIIHHEB_51 | 211842 | 213754 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.33 | L33696 |
| LNIIHHEB_9 | 2627 | 3793 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 93.57 | 100.00 | GU014535 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LNIIHHEB_9 | 1613 | 2473 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| LNIIHHEB_9 | 4009 | 4806 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| LNIIHHEB_51 | 211842 | 213755 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856407.1 |
| LNIIHHEB_9 | 595 | 1434 | estT | macrolide hydrolase EstT | BLASTX | 98.94 | 100.00 | WP_185148407.1 |
| LNIIHHEB_9 | 2627 | 3790 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 92.27 | 100.00 | WP_008651082.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||