Genome ID：GCA_028748025.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	4	16.88

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CJIGEPLI_1	2725189	2726043	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
CJIGEPLI_1	2706476	2707678	blt	ARO:3003006	blt	99.25	100.00	L32599.1
CJIGEPLI_1	2506336	2507505	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
CJIGEPLI_1	1352431	1352748	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
CJIGEPLI_1	1352093	1352431	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
CJIGEPLI_1	892352	894922	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.53	100.00	AL009126.3
CJIGEPLI_1	584786	586429	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
CJIGEPLI_1	338814	339407	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
CJIGEPLI_1	288293	289726	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
CJIGEPLI_1	275480	276400	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CJIGEPLI_1	275480	276400	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
CJIGEPLI_1	4220528	4221904	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	99.42	100.00	D12567
CJIGEPLI_1	2725191	2726043	aadK	Streptomycin	98.71	99.77	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CJIGEPLI_1	275480	276397	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
CJIGEPLI_1	584789	586429	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
CJIGEPLI_1	4220531	4221904	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	99.34	100.00	WP_063856081.1
CJIGEPLI_1	2725192	2726043	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
CJIGEPLI_1	4218000	4218518	satA	streptothricin N-acetyltransferase SatA	BLASTX	92.49	100.00	WP_003242546.1
CJIGEPLI_1	2030821	2033415	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CJIGEPLI_1	3730519	3731661	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
CJIGEPLI_1	3732144	3733325	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
CJIGEPLI_1	3731680	3732129	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
CJIGEPLI_1	3323996	3324781	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
CJIGEPLI_1	3313004	3320140	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.99	100.00	NP_391076
CJIGEPLI_1	3320160	3321098	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
CJIGEPLI_1	2264216	2264857	hlyIII	0.0	Hemolysin III	Exotoxin	99.84	100.00	NP_390062
CJIGEPLI_1	3322774	3323970	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.67	100.00	NP_391079
CJIGEPLI_1	1980445	1982208	dep/capD	0.0	Capsule	Immune modulation	99.60	100.00	NP_389723
CJIGEPLI_1	3321126	3322745	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.51	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CJIGEPLI_1	132481	133617	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
CJIGEPLI_1	18665	19534	pdxS	3.16e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
CJIGEPLI_1	1665870	1666646	CodY	3.45e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
CJIGEPLI_1	3578925	3579494	ClpP	2.56e-98	part of proteolytic complex	81.05	97.44	BAB94595