Genome ID：GCA_028806935.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LHADDBJD_57	490957	491295	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LHADDBJD_57	490640	490957	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LHADDBJD_62	305027	305881	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
LHADDBJD_62	286358	287560	blt	ARO:3003006	blt	99.00	100.00	L32599.1
LHADDBJD_25	255418	257988	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LHADDBJD_28	108123	109043	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
LHADDBJD_28	94790	96229	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
LHADDBJD_62	59203	60372	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LHADDBJD_28	45158	45751	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LHADDBJD_42	29458	31104	vmlR	ARO:3004476	vmlR	98.54	100.18	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LHADDBJD_21	36332	37708	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.84	100.00	X08034
LHADDBJD_62	305029	305881	aadK	Streptomycin	98.71	99.77	M26879
LHADDBJD_28	108123	109043	mph(K)	Spiramycin, Telithromycin	97.72	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LHADDBJD_21	36332	37705	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.69	100.00	WP_003242953.1
LHADDBJD_42	29458	31101	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
LHADDBJD_62	305030	305881	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
LHADDBJD_28	108126	109043	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
LHADDBJD_21	39661	40179	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
LHADDBJD_30	122733	125330	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.60	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LHADDBJD_44	380450	381388	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
LHADDBJD_21	521042	522223	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LHADDBJD_44	378803	380422	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.26	100.00	NP_391078
LHADDBJD_44	376767	377552	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.24	100.00	NP_391080
LHADDBJD_30	218880	219521	hlyIII	0.0	Hemolysin III	Exotoxin	99.22	100.00	NP_390062
LHADDBJD_21	522706	523848	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
LHADDBJD_44	377578	378774	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.91	100.00	NP_391079
LHADDBJD_30	75792	77555	dep/capD	0.0	Capsule	Immune modulation	98.87	100.00	NP_389723
LHADDBJD_44	381408	388544	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.82	100.00	NP_391076
LHADDBJD_21	522238	522687	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LHADDBJD_53	31777	32913	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LHADDBJD_49	4372	5241	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LHADDBJD_57	181094	180318	CodY	7.45e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LHADDBJD_44	115264	114695	ClpP	2.95e-99	part of proteolytic complex	81.05	97.44	BAB94595
LHADDBJD_57	642695	642303	spxA1	5.85e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LHADDBJD_57	642695	642303	spx	3.49e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LHADDBJD_56	20636	20878	SpoVG	7.52e-39	RNA-binding protein	81.48	79.41	AAT02994
LHADDBJD_42	77859	77662	CspA	4.18e-32	cold shock protein	90.91	100.00	CAA62903
LHADDBJD_30	231485	231679	CspD	2.20e-28	cold shock protein	81.54	98.48	CAC99957