Genome ID:GCA_028807035.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EBMCACGO_51490957491295ykkCARO:3003063ykkC100.00100.00AL009126.1
EBMCACGO_51490640490957ykkDARO:3003064ykkD99.05100.00AL009126.1
EBMCACGO_67469363471933Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
EBMCACGO_65305027305881aadKARO:3002627aadK98.24100.00AL009126.1
EBMCACGO_65286358287560bltARO:3003006blt99.00100.00L32599.1
EBMCACGO_67183164184810vmlRARO:3004476vmlR98.54100.18NC_000964.3
EBMCACGO_43108123109043mphKARO:3004541mphK97.71100.00CP010314.1
EBMCACGO_439479096229lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
EBMCACGO_655920360372bmrARO:3003007bmr99.74100.00M33768.1
EBMCACGO_434515845751tmrBARO:3003059tmrB100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EBMCACGO_363633337709tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.84100.00X08034
EBMCACGO_65305029305881aadKStreptomycin98.7199.77M26879
EBMCACGO_43108123109043mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EBMCACGO_363633337706tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_003242953.1
EBMCACGO_67183167184810vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
EBMCACGO_65305030305881aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
EBMCACGO_43108126109043mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
EBMCACGO_363966240180satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
EBMCACGO_7232422235019rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
EBMCACGO_54109285110223dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
EBMCACGO_36521004522185capB0.0CapsuleImmune modulation99.66100.00NP_391471
EBMCACGO_54110251111870dhbE0.0BacillibactinNutritional/Metabolic factor99.26100.00NP_391078
EBMCACGO_54113121113906dhbA0.0BacillibactinNutritional/Metabolic factor99.24100.00NP_391080
EBMCACGO_7138231138872hlyIII0.0Hemolysin IIIExotoxin99.22100.00NP_390062
EBMCACGO_36522668523810capA0.0CapsuleImmune modulation98.95100.00NP_391469
EBMCACGO_54111899113095dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
EBMCACGO_7280197281960dep/capD0.0CapsuleImmune modulation98.87100.00NP_389723
EBMCACGO_54102129109265dhbF0.0BacillibactinNutritional/Metabolic factor98.82100.00NP_391076
EBMCACGO_36522200522649capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EBMCACGO_632806226926tufA0.0elongation factor Tu84.9695.69AHM69299
EBMCACGO_641131010441pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
EBMCACGO_51181094180318CodY7.45e-125nutrient-responsive regulator81.08100.00ACJ80679
EBMCACGO_54375409375978ClpP2.95e-99part of proteolytic complex81.0597.44BAB94595
EBMCACGO_51642614642222spxA15.85e-70redox-responsive transcription factor83.97100.00AAF21893
EBMCACGO_51642614642222spx3.49e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
EBMCACGO_423471534473SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
EBMCACGO_67136409136606CspA2.16e-31cold shock protein90.91100.00CAA62903
EBMCACGO_7126267126073CspD1.80e-28cold shock protein81.5498.48CAC99957