Genome ID:GCA_028807155.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ACCHCDKJ_24490957491295ykkCARO:3003063ykkC100.00100.00AL009126.1
ACCHCDKJ_24490640490957ykkDARO:3003064ykkD99.05100.00AL009126.1
ACCHCDKJ_47304883305737aadKARO:3002627aadK98.24100.00AL009126.1
ACCHCDKJ_47286214287416bltARO:3003006blt99.00100.00L32599.1
ACCHCDKJ_61256484259054Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
ACCHCDKJ_128108123109043mphKARO:3004541mphK97.71100.00CP010314.1
ACCHCDKJ_1289479096229lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
ACCHCDKJ_475920360372bmrARO:3003007bmr99.74100.00M33768.1
ACCHCDKJ_1284515845751tmrBARO:3003059tmrB100.00100.00AL009126.3
ACCHCDKJ_62920430850vmlRARO:3004476vmlR98.54100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ACCHCDKJ_1103633337709tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.84100.00X08034
ACCHCDKJ_47304885305737aadKStreptomycin98.7199.77M26879
ACCHCDKJ_128108123109043mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ACCHCDKJ_1103633337706tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_003242953.1
ACCHCDKJ_62920430847vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
ACCHCDKJ_47304886305737aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
ACCHCDKJ_128108126109043mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
ACCHCDKJ_1103966240180satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
ACCHCDKJ_55628458881rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
ACCHCDKJ_133109285110223dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
ACCHCDKJ_110520995522176capB0.0CapsuleImmune modulation99.66100.00NP_391471
ACCHCDKJ_133110251111870dhbE0.0BacillibactinNutritional/Metabolic factor99.26100.00NP_391078
ACCHCDKJ_133113121113906dhbA0.0BacillibactinNutritional/Metabolic factor99.24100.00NP_391080
ACCHCDKJ_5152431153072hlyIII0.0Hemolysin IIIExotoxin99.22100.00NP_390062
ACCHCDKJ_110522659523801capA0.0CapsuleImmune modulation98.95100.00NP_391469
ACCHCDKJ_133111899113095dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
ACCHCDKJ_5934311106dep/capD0.0CapsuleImmune modulation98.87100.00NP_389723
ACCHCDKJ_133102129109265dhbF0.0BacillibactinNutritional/Metabolic factor98.82100.00NP_391076
ACCHCDKJ_110522191522640capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ACCHCDKJ_572806226926tufA0.0elongation factor Tu84.9695.69AHM69299
ACCHCDKJ_1211131010441pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
ACCHCDKJ_24181094180318CodY7.45e-125nutrient-responsive regulator81.08100.00ACJ80679
ACCHCDKJ_133375409375978ClpP2.95e-99part of proteolytic complex81.0597.44BAB94595
ACCHCDKJ_24642452642060spxA15.85e-70redox-responsive transcription factor83.97100.00AAF21893
ACCHCDKJ_24642452642060spx3.49e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
ACCHCDKJ_933471534473SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
ACCHCDKJ_67760577408CspA9.24e-32cold shock protein90.91100.00CAA62903
ACCHCDKJ_5165036165230CspD1.79e-28cold shock protein81.5498.48CAC99957